Gene: AT3G20740

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G20740
  • Transcript Identifier AT3G20740.1
  • Gene Type Coding gene
  • Location Chr3 : 7249064-7252254 : negative

Gene Family Information

  • ID HOM05D004312
  • #Genes/#Species 165/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G20740.1
  • symbol FIE
  • Alias FIE1,FERTILIZATION-INDEPENDENT ENDOSPERM 1,FIS3
  • full_name FERTILIZATION-INDEPENDENT ENDOSPERM
  • uniprot Q9LT47

Descriptions

  • Description Transducin/WD40 repeat-like superfamily protein
  • Computational description FERTILIZATION-INDEPENDENT ENDOSPERM (FIE); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT1G79990.1); Has 16392 Blast hits to 11301 proteins in 524 species: Archae - 16; Bacteria - 2767; Metazoa - 5614; Fungi - 4038; Plants - 1850; Viruses - 0; Other Eukaryotes - 2107 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009960
ISO
PLAZA Integrative Orthologyendosperm development Os08g0137250
GO:0048316
ISO
PLAZA Integrative Orthologyseed development Os08g0137250
GO:0009908
ISO
PLAZA Integrative Orthologyflower development Os08g0137250
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy Os08g0137250
GO:0090696
ISO
PLAZA Integrative Orthologypost-embryonic plant organ development Os08g0137100
GO:0010231
ISO
PLAZA Integrative Orthologymaintenance of seed dormancy Os08g0137100
GO:0006325
IEA
GOA Databasechromatin organization
GO:0070734
IEA
GOA Databasehistone H3-K27 methylation
GO:0000122
IBA
Gene Ontologynegative regulation of transcription by RNA polymerase II1
GO:0006342
IBA
Gene Ontologychromatin silencing1
GO:0009409
IEP
Gene Ontologyresponse to cold2
GO:0016571
IMP
Gene Ontologyhistone methylation3
GO:0006349
IMP
Gene Ontologyregulation of gene expression by genetic imprinting3
GO:0000003
IMP
Gene Ontologyreproduction4
GO:2000014
IMP
Gene Ontologyregulation of endosperm development5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031491
IBA
Gene Ontologynucleosome binding1
GO:0005515
IPI
Gene Ontologyprotein binding6
GO:0005515
IEA
InterProprotein binding
GO:0046976
IBA
Gene Ontologyhistone methyltransferase activity (H3-K27 specific)1
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031519
ISO
PLAZA Integrative OrthologyPcG protein complex Os08g0137250
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0035098
IBA
Gene OntologyESC/E(Z) complex1
GO:0005677
IDA
Gene Ontologychromatin silencing complex8
GO:0080008
ISS
Gene OntologyCul4-RING E3 ubiquitin ligase complex9
GO:0043078
IDA
Gene Ontologypolar nucleus6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR001680 WD40 repeat
Mapman id Description
12.3.3.2.1.1.2 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.component FIE