Gene: Cc05_g13230

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc05_g13230
  • Transcript Identifier Cc05_g13230.1
  • Gene Type Coding gene
  • Location chr5 : 26889905-26894027 : negative

Gene Family Information

  • ID HOM05D004312
  • #Genes/#Species 165/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q8VZY6
  • UniProtKB B0LUS8
  • UniProtKB B9I7G3
  • UniProtKB Q8GV45
  • UniProtKB Q8VZY7
  • UniProtKB Q9LT47
  • id GSCOCG00021090001

Descriptions

  • Description Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000003
ISO
PLAZA Integrative Orthologyreproduction AT3G20740
GO:0070734
ISO
PLAZA Integrative Orthologyhistone H3-K27 methylation Os08g0137250
GO:0016571
ISO
PLAZA Integrative Orthologyhistone methylation AT3G20740
GO:2000014
ISO
PLAZA Integrative Orthologyregulation of endosperm development AT3G20740
GO:0009908
ISO
PLAZA Integrative Orthologyflower development Os08g0137250
GO:0006349
ISO
PLAZA Integrative Orthologyregulation of gene expression by genetic imprinting AT3G20740
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G20740
GO:0006342
ISO
PLAZA Integrative Orthologychromatin silencing Os08g0137250
GO:0009960
ISO
PLAZA Integrative Orthologyendosperm development Os08g0137250
GO:0048316
ISO
PLAZA Integrative Orthologyseed development Os08g0137250
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy Os08g0137250
GO:0090696
ISO
PLAZA Integrative Orthologypost-embryonic plant organ development Os08g0137100
GO:0010231
ISO
PLAZA Integrative Orthologymaintenance of seed dormancy Os08g0137100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031519
ISO
PLAZA Integrative OrthologyPcG protein complex Os08g0137250
GO:0005677
ISO
PLAZA Integrative Orthologychromatin silencing complex AT3G20740
GO:0043078
ISO
PLAZA Integrative Orthologypolar nucleus AT3G20740

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
12.3.3.2.1.1.2 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.VRN/FIS/EMF core subcomplexes.component FIE