Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p17650 Brassica napus
A03p56690 Brassica napus
A10p13550 Brassica napus
Aa31LG3G12190 Aethionema arabicum
Aa31LG5G11770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2287 Anthoceros agrestis
Actinidia33520 Actinidia chinensis
Actinidia35441 Actinidia chinensis
Actinidia37105 Actinidia chinensis
Ah.09g236430 Amaranthus hybridus
AL7G26520 Arabidopsis lyrata
AL8G31910 Arabidopsis lyrata
Aqoxy3G04043 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.22L1JW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LZ5KER Arachis hypogaea
AT4G26430 Arabidopsis thaliana
AT5G56280 Arabidopsis thaliana
ATR0751G160 Amborella trichopoda
Atru.chr2.3911 Acer truncatum
AUR62012490 Chenopodium quinoa
AUR62014705 Chenopodium quinoa
AUR62042211 Chenopodium quinoa
BcaC04g20112 Brassica carinata
BcaC06g32749 Brassica carinata
BcaC09g50705 Brassica carinata
BcaNung02419 Brassica carinata
BcaNung02422 Brassica carinata
BolC1t02162H Brassica oleracea
BolC7t45977H Brassica oleracea
BolC9t57609H Brassica oleracea
BraA01t01720Z Brassica rapa
BraA03t14739Z Brassica rapa
BraA10t43459Z Brassica rapa
C01p22290 Brassica napus
C07p54890 Brassica napus
C09p47550 Brassica napus
CAN.G943.20 Capsicum annuum
CANSAT11G0977 Cannabis sativa
CARHR233990 Cardamine hirsuta
CARHR269680 Cardamine hirsuta
Carub.0007s1450 Capsella rubella
Carub.0008s1660 Capsella rubella
Ca_14123_v3 Cicer arietinum L.
CBR_g38485 Chara braunii
Cc05_g15830 Coffea canephora
CDE02G0966 Ceratophyllum demersum
CDE02G2312 Ceratophyllum demersum
Cfa024889 Carpinus fangiana
Ciclev10008979m.g Citrus clementina
CiPaw.11G211400 Carya illinoinensis
ClCG09G021790 Citrullus lanatus
Cpa.g.sc12.53 Carica papaya
Cre11.g467645 Chlamydomonas reinhardtii
Cre11.g467647 Chlamydomonas reinhardtii
CsaV3_7G021250 Cucumis sativus L.
CSS0003988 Camellia sinensis var. sinensis
CSS0027583 Camellia sinensis var. sinensis
CSS0046656 Camellia sinensis var. sinensis
DCAR_013752 Daucus carota
DCAR_016810 Daucus carota
Dinv19634 Davidia involucrata
Dinv42528 Davidia involucrata
Duzib170G0346 Durio zibethinus
Duzib268G1454 Durio zibethinus
ECA240G3010 Erigeron canadensis
EL10Ac8g20543 Beta vulgaris
Eucgr.F03640 Eucalyptus grandis
FAN11G0503 Fragaria x ananassa
FAN16G1338 Fragaria x ananassa
FAN21G3674 Fragaria x ananassa
FAN25G1562 Fragaria x ananassa
FvH4_3g41360 Fragaria vesca
Glyma.04G115900 Glycine max
Glyma.06G320400 Glycine max
Gohir.A08G026400 Gossypium hirsutum
Gohir.A13G127700 Gossypium hirsutum
Gohir.D06G094801 Gossypium hirsutum
Gohir.D08G036800 Gossypium hirsutum
Gohir.D13G131400 Gossypium hirsutum
Gohir.D13G226300 Gossypium hirsutum
Gorai.004G034800 Gossypium raimondii
Gorai.010G109300 Gossypium raimondii
Gorai.013G147400 Gossypium raimondii
GSVIVG01014869001 Vitis vinifera
HanXRQChr01g0024181 Helianthus annuus
HanXRQChr03g0076651 Helianthus annuus
HanXRQChr13g0409281 Helianthus annuus
Haze_09926 Corylus avellana
Haze_09928 Corylus avellana
Hma1.2p1_0193F.1_g084430 Hydrangea macrophylla
Hund12926 Selenicereus undatus
Lalb_Chr04g0259411 Lupinus albus
Lalb_Chr18g0048731 Lupinus albus
Lj1A902T42 Lonicera japonica
Lj3g0022167 Lotus japonicus
Lsat_1_v5_gn_4_100601 Lactuca sativa
Lsat_1_v5_gn_9_88440 Lactuca sativa
Manes.01G008200 Manihot esculenta
Manes.01G008500 Manihot esculenta
Mapoly0151s0043 Marchantia polymorpha
MCO07G296 Micromonas commoda
MD03G1045500 Malus domestica
MD11G1047700 Malus domestica
Medtr3g009270 Medicago truncatula
MELO3C013230.2 Cucumis melo
Migut.M01574 Erythranthe guttata
MSTRG.14533 Avicennia marina
Nitab4.5_0000294g0190 Nicotiana tabacum
Nitab4.5_0000611g0160 Nicotiana tabacum
Nitab4.5_0001235g0020 Nicotiana tabacum
Nitab4.5_0004488g0050 Nicotiana tabacum
Nn1g07611 Nelumbo nucifera
Nn2g14378 Nelumbo nucifera
Oeu052019.1 Olea europaea
Oeu052877.1 Olea europaea
Oeu061794.1 Olea europaea
Os08g0500000 Oryza sativa ssp. japonica
Os12g0621900 Oryza sativa ssp. japonica
Os12g0622900 Oryza sativa ssp. japonica
Peaxi162Scf00232g00910 Petunia axillaris
PGR031G3775 Punica granatum
PGSC0003DMG400011272 Solanum tuberosum
PGSC0003DMG400022138 Solanum tuberosum
Phvul.005G006100 Phaseolus vulgaris
Potri.011G169900 Populus trichocarpa
Pp3c14_22830 Physcomitrium patens
Pp3c17_21990 Physcomitrium patens
Pp3c1_39390 Physcomitrium patens
PRCOL_00003462 Prasinoderma coloniale
Prupe.6G036800 Prunus persica
Psat5g231040 Pisum sativum
PSO063G3722 Papaver somniferum
PSO782G2166 Papaver somniferum
QL08p000150 Quercus lobata
RcHm_v2.0_Chr5g0074251 Rosa chinensis
RcHm_v2.0_Chr5g0074261 Rosa chinensis
RcHm_v2.0_Chr5g0075511 Rosa chinensis
Rhsim04G0006600 Rhododendron simsii
Sabra11G0137100 Salix brachista
SalBow8G0719 Salvia bowleyana
Sc03g0011830 Simmondsia chinensis
Sed0017579 Sechium edule
Sed0022093 Sechium edule
SEGI_37935 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40229 Striga asiatica
SGA_v2.0_scaffold7G03561 Striga asiatica
SHI16643 Sapria himalayana
SMO367G0766 Selaginella moellendorffii
Solyc10g005660.3 Solanum lycopersicum
Sopen10g001630 Solanum pennellii
Sp6g18130 Schrenkiella parvula
Sp7g24340 Schrenkiella parvula
TAR626G0831 Trochodendron aralioides
THA.LOC104811707 Tarenaya hassleriana
THA.LOC104817729 Tarenaya hassleriana
Thecc.07G000400 Theobroma cacao
Thhalv10014144m.g Eutrema salsugineum
Thhalv10025688m.g Eutrema salsugineum
TPR.G16718 Trifolium pratense
TWI14G0209 Tripterygium wilfordii
TWI38G1388 Tripterygium wilfordii
TWI39G0164 Tripterygium wilfordii
unitig_46.g18525 Utricularia gibba
vmacro09793 Vaccinium macrocarpon
VMungo1080G0729 Vigna mungo
Zm00001eb034040 Zea mays
Zm00001eb199540 Zea mays

User provided reference genes

Program Settings