Gene: Duzib170G0346

General Information

Structural Information

  • Species Durio zibethinus
  • Gene Identifier Duzib170G0346
  • Transcript Identifier Duzib170G0346.02
  • Gene Type Coding gene
  • Location NW_019167871.1 : 6783630-6787014 : positive

Gene Family Information

  • ID HOM05D004250
  • #Genes/#Species 167/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name LOC111301501
  • name XM_022897208.1
  • pid XP_022752943.1
  • id gene-LOC111301501
  • uniprot A0A6P5ZKR9

Descriptions

  • product COP9 signalosome complex subunit 6a-like, transcript variant X3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G56280
GO:0010387
ISO
PLAZA Integrative OrthologyCOP9 signalosome assembly AT4G26430
GO:0030163
ISO
PLAZA Integrative Orthologyprotein catabolic process AT5G56280
GO:0007275
ISO
PLAZA Integrative Orthologymulticellular organism development AT5G56280
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT5G56280
GO:1990641
ISO
PLAZA Integrative Orthologyresponse to iron ion starvation Os08g0500000
GO:0000338
IEA
GOA Databaseprotein deneddylation
GO:0000338
IEA
InterProprotein deneddylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008237
IEA
GOA Databasemetallopeptidase activity
GO:0008237
IEA
InterPrometallopeptidase activity
GO:0070122
IEA
GOA Databaseisopeptidase activity
GO:0070122
IEA
InterProisopeptidase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005737
IEA
GOA Databasecytoplasm
GO:0008180
IEA
GOA DatabaseCOP9 signalosome
GO:0008180
IEA
InterProCOP9 signalosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000555 JAB1/MPN/MOV34 metalloenzyme domain
IPR024969 Rpn11/EIF3F, C-terminal
IPR033859 COP9 signalosome subunit 6
Mapman id Description
19.2.3.3.1.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.COP9 signalosome complex.component CSN6