Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p47800 Brassica napus
Aa31sc141G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2563 Anthoceros agrestis
Actinidia34806 Actinidia chinensis
Actinidia38868 Actinidia chinensis
AL5G35970 Arabidopsis lyrata
Aqoxy4G03296 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1PX64U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5LR8AY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DJS8Z9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ED1Y34 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ET3M0C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EYW761 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I4EZ5E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LC1BQN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LJ1MV6 Arachis hypogaea
AT3G54860 Arabidopsis thaliana
ATR1132G004 Amborella trichopoda
Atru.chr12.837 Acer truncatum
AUR62026961 Chenopodium quinoa
AUR62036467 Chenopodium quinoa
AUR62041377 Chenopodium quinoa
AUR62041379 Chenopodium quinoa
AUR62041380 Chenopodium quinoa
BcaB01g00152 Brassica carinata
BcaC07g39772 Brassica carinata
BcaNung06953 Brassica carinata
BolC8t50614H Brassica oleracea
BraA09t40237Z Brassica rapa
C08p30050 Brassica napus
CAN.G694.36 Capsicum annuum
CANSAT56G0520 Cannabis sativa
CARHR164840 Cardamine hirsuta
Carub.0005s2147 Capsella rubella
Carub.0005s2206 Capsella rubella
Carub.0005s2207 Capsella rubella
Ca_10545_v3 Cicer arietinum L.
CBR_g31454 Chara braunii
CBR_g52606 Chara braunii
Cc02_g10960 Coffea canephora
Cc02_g10970 Coffea canephora
CDE09G0908 Ceratophyllum demersum
Cfa001676 Carpinus fangiana
Cfa022006 Carpinus fangiana
Ciclev10031072m.g Citrus clementina
CiPaw.01G268900 Carya illinoinensis
ClCG05G021220 Citrullus lanatus
COL.COLO4_17138 Corchorus olitorius
Cpa.g.sc1603.2 Carica papaya
Cpa.g.sc912.1 Carica papaya
Cre12.g515550 Chlamydomonas reinhardtii
CsaV3_5G036050 Cucumis sativus L.
CSS0012456 Camellia sinensis var. sinensis
DCAR_006417 Daucus carota
Dinv31228 Davidia involucrata
Duzib114G0264 Durio zibethinus
ECA232G1554 Erigeron canadensis
EL10Ac7g16698 Beta vulgaris
Eucgr.G02865 Eucalyptus grandis
FAN01G0054 Fragaria x ananassa
FAN03G3391 Fragaria x ananassa
FAN04G2028 Fragaria x ananassa
FAN04G2411 Fragaria x ananassa
FAN06G0013 Fragaria x ananassa
FAN06G0297 Fragaria x ananassa
FAN10G0146 Fragaria x ananassa
FAN10G1099 Fragaria x ananassa
FAN13G0469 Fragaria x ananassa
FAN13G1026 Fragaria x ananassa
FAN18G2159 Fragaria x ananassa
FvH4_5g35750 Fragaria vesca
FvH4_7g18830 Fragaria vesca
Glyma.10G208100 Glycine max
Gohir.A05G411400 Gossypium hirsutum
Gohir.D04G004600 Gossypium hirsutum
Gorai.012G005800 Gossypium raimondii
GSVIVG01016224001 Vitis vinifera
HanXRQChr09g0248221 Helianthus annuus
HanXRQChr12g0376891 Helianthus annuus
Haze_16858 Corylus avellana
HPP92_008472 Vanilla planifolia
HPP92_008482 Vanilla planifolia
Hund24846 Selenicereus undatus
Lalb_Chr21g0313701 Lupinus albus
Lalb_Chr21g0313711 Lupinus albus
Lj2C19G5 Lonicera japonica
Lj5g0013282 Lotus japonicus
Lsat_1_v5_gn_9_70141 Lactuca sativa
Manes.15G095600 Manihot esculenta
Mapoly0054s0015 Marchantia polymorpha
MBI09_g03016_MAGBIO Magnolia biondii
MBI09_g03431_MAGBIO Magnolia biondii
MCO07G397 Micromonas commoda
MD01G1103400 Malus domestica
MD07G1170300 Malus domestica
Medtr1g094200 Medicago truncatula
MELO3C012405.2 Cucumis melo
MELO3C027676.2 Cucumis melo
MELO3C029984.2 Cucumis melo
MELO3C030131.2 Cucumis melo
MELO3C031144.2 Cucumis melo
MELO3C035290.2 Cucumis melo
Migut.F01959 Erythranthe guttata
MSTRG.27482 Avicennia marina
Nitab4.5_0000096g0310 Nicotiana tabacum
Nitab4.5_0001760g0040 Nicotiana tabacum
Nn2g13792 Nelumbo nucifera
Oeu000792.2 Olea europaea
Os04g0223000 Oryza sativa ssp. japonica
Peaxi162Scf00176g01310 Petunia axillaris
Peaxi162Scf00176g01415 Petunia axillaris
PGR142G2592 Punica granatum
PGSC0003DMG400023478 Solanum tuberosum
Phvul.005G180400 Phaseolus vulgaris
Potri.008G035600 Populus trichocarpa
Potri.010G226600 Populus trichocarpa
Pp3c17_5740 Physcomitrium patens
PRCOL_00000311 Prasinoderma coloniale
Prupe.2G209100 Prunus persica
Psat6g180120 Pisum sativum
PSO170G6718 Papaver somniferum
PSO339G0163 Papaver somniferum
PSO801G0085 Papaver somniferum
QL08p054435 Quercus lobata
QL08p054473 Quercus lobata
QL08p054558 Quercus lobata
QL08p054613 Quercus lobata
QL08p054691 Quercus lobata
RcHm_v2.0_Chr1g0362641 Rosa chinensis
RcHm_v2.0_Chr6g0252451 Rosa chinensis
RcHm_v2.0_Chr7g0237381 Rosa chinensis
RcHm_v2.0_Chr7g0237391 Rosa chinensis
RcHm_v2.0_Chr7g0237401 Rosa chinensis
Rhsim03G0230200 Rhododendron simsii
Sabra08G0023800 Salix brachista
Sabra10G0174900 Salix brachista
SalBow4G2353 Salvia bowleyana
SalBow4G2572 Salvia bowleyana
Sc20g0001740 Simmondsia chinensis
Sed0026489 Sechium edule
SEGI_01819 Sequoiadendron giganteum
SEGI_10422 Sequoiadendron giganteum
SEGI_16046 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21390 Striga asiatica
SHI08894 Sapria himalayana
SHI08895 Sapria himalayana
SMO358G0561 Selaginella moellendorffii
Solyc01g013980.1 Solanum lycopersicum
Solyc01g016900.1 Solanum lycopersicum
Solyc05g024110.1 Solanum lycopersicum
Solyc05g024120.3 Solanum lycopersicum
Solyc05g055600.4 Solanum lycopersicum
Solyc11g030770.1 Solanum lycopersicum
Sopen01g012580 Solanum pennellii
Sopen05g016270 Solanum pennellii
Sopen05g018790 Solanum pennellii
Sopen05g034050 Solanum pennellii
Sp5g07560 Schrenkiella parvula
TAR633G0060 Trochodendron aralioides
THA.LOC104826473 Tarenaya hassleriana
Thecc.10G082900 Theobroma cacao
Thhalv10010229m.g Eutrema salsugineum
TPR.G10283 Trifolium pratense
TWI38G0761 Tripterygium wilfordii
unitig_899.g14450 Utricularia gibba
vmacro07123 Vaccinium macrocarpon
VMungo1080G0141 Vigna mungo
Zm00001eb356850 Zea mays

User provided reference genes

Program Settings