Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p04200 Brassica napus
A03p08370 Brassica napus
A10p21960 Brassica napus
Aa31LG11G12210 Aethionema arabicum
Aa31LG5G13880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.146 Anthoceros agrestis
Actinidia03266 Actinidia chinensis
Ah.04g159100 Amaranthus hybridus
AL3G12970 Arabidopsis lyrata
AL6G28510 Arabidopsis lyrata
Aqoxy2G04143 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.26W00C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.28W6CD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A3L5K6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D9AMXU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R6HD8X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V65UZ0 Arachis hypogaea
AT3G03340 Arabidopsis thaliana
AT5G17440 Arabidopsis thaliana
ATR0743G001 Amborella trichopoda
Atru.chr12.1727 Acer truncatum
AUR62000293 Chenopodium quinoa
AUR62006639 Chenopodium quinoa
BcaB01g04937 Brassica carinata
BcaB01g05204 Brassica carinata
BcaB08g36770 Brassica carinata
BcaC03g13520 Brassica carinata
BcaC04g18792 Brassica carinata
BolC2t06818H Brassica oleracea
BolC3t13465H Brassica oleracea
BolC9t58809H Brassica oleracea
BraA02t05383Z Brassica rapa
BraA03t10158Z Brassica rapa
BraA10t44254Z Brassica rapa
C02p09080 Brassica napus
C03p09760 Brassica napus
C03p51090 Brassica napus
C09p59710 Brassica napus
CAN.G1921.6 Capsicum annuum
CANSAT54G2186 Cannabis sativa
CARHR077380 Cardamine hirsuta
CARHR195770 Cardamine hirsuta
Carub.0003s0251 Capsella rubella
Carub.0006s1566 Capsella rubella
Ca_08002_v3 Cicer arietinum L.
CBR_g36466 Chara braunii
Cc09_g03900 Coffea canephora
CDE04G0807 Ceratophyllum demersum
CDE07G0335 Ceratophyllum demersum
Cfa006248 Carpinus fangiana
Cfa025344 Carpinus fangiana
Ciclev10012249m.g Citrus clementina
CiPaw.07G082000 Carya illinoinensis
ClCG11G009760 Citrullus lanatus
COL.COLO4_08422 Corchorus olitorius
Cpa.g.sc123.38 Carica papaya
CsaV3_2G010530 Cucumis sativus L.
CSS0000339 Camellia sinensis var. sinensis
CSS0002176 Camellia sinensis var. sinensis
DCAR_030003 Daucus carota
Dinv00535 Davidia involucrata
Dinv29084 Davidia involucrata
Duzib235G1318 Durio zibethinus
ECA232G1350 Erigeron canadensis
EL10Ac4g10002 Beta vulgaris
Eucgr.B01428 Eucalyptus grandis
FAN02G3263 Fragaria x ananassa
FAN05G5080 Fragaria x ananassa
FAN09G2946 Fragaria x ananassa
FAN14G5194 Fragaria x ananassa
FvH4_6g00250 Fragaria vesca
Glyma.09G248800 Glycine max
Glyma.18G243900 Glycine max
Gohir.A02G105800 Gossypium hirsutum
Gohir.D03G078000 Gossypium hirsutum
Gorai.003G086100 Gossypium raimondii
GSVIVG01019063001 Vitis vinifera
HanXRQChr04g0101101 Helianthus annuus
HanXRQChr15g0492211 Helianthus annuus
Haze_04586 Corylus avellana
Haze_26867 Corylus avellana
Hma1.2p1_0220F.1_g092980 Hydrangea macrophylla
HPP92_004648 Vanilla planifolia
Hund07362 Selenicereus undatus
Hund21914 Selenicereus undatus
Lalb_Chr01g0020581 Lupinus albus
Lalb_Chr01g0020591 Lupinus albus
Lalb_Chr03g0038051 Lupinus albus
Lj1A579T48 Lonicera japonica
Lj1C579T11 Lonicera japonica
Lj1g0022981 Lotus japonicus
Lsat_1_v5_gn_0_14781 Lactuca sativa
Manes.12G003500 Manihot esculenta
Manes.13G003600 Manihot esculenta
Mapoly0074s0043 Marchantia polymorpha
MBI11_g10486_MAGBIO Magnolia biondii
MD04G1246800 Malus domestica
MD12G1263400 Malus domestica
Medtr7g080320 Medicago truncatula
MELO3C008563.2 Cucumis melo
Migut.F01862 Erythranthe guttata
Migut.F02106 Erythranthe guttata
MSTRG.8204 Avicennia marina
Nitab4.5_0000080g0180 Nicotiana tabacum
Nitab4.5_0000582g0030 Nicotiana tabacum
Nitab4.5_0004652g0020 Nicotiana tabacum
Nn1g09712 Nelumbo nucifera
Nn7g37558 Nelumbo nucifera
Oeu034779.1 Olea europaea
Oeu064498.2 Olea europaea
Os02g0605600 Oryza sativa ssp. japonica
Os03g0843500 Oryza sativa ssp. japonica
Peaxi162Scf00353g00751 Petunia axillaris
Peaxi162Scf00742g00213 Petunia axillaris
PGR119G0338 Punica granatum
PGSC0003DMG402023454 Solanum tuberosum
Phvul.008G052700 Phaseolus vulgaris
Potri.013G084800 Populus trichocarpa
Potri.019G055000 Populus trichocarpa
Pp3c16_8650 Physcomitrium patens
Pp3c25_5550 Physcomitrium patens
PRCOL_00002934 Prasinoderma coloniale
Prupe.6G363000 Prunus persica
Psat3g102400 Pisum sativum
PSO210G5049 Papaver somniferum
PSO675G0506 Papaver somniferum
PSO832G1195 Papaver somniferum
QL01p048231 Quercus lobata
QL01p048235 Quercus lobata
QL01p048256 Quercus lobata
RcHm_v2.0_Chr3g0447621 Rosa chinensis
Rhsim09G0129000 Rhododendron simsii
Sabra13G0078600 Salix brachista
Sabra19G0064000 Salix brachista
SalBow1G8230 Salvia bowleyana
SalBow6G2550 Salvia bowleyana
Sc09g0001390 Simmondsia chinensis
Sc16g0010470 Simmondsia chinensis
Sed0018905 Sechium edule
SEGI_02846 Sequoiadendron giganteum
SEGI_05832 Sequoiadendron giganteum
SEGI_12521 Sequoiadendron giganteum
SEGI_20593 Sequoiadendron giganteum
SEGI_21671 Sequoiadendron giganteum
SEGI_29242 Sequoiadendron giganteum
SEGI_38734 Sequoiadendron giganteum
SEGI_38814 Sequoiadendron giganteum
SGA_v2.0_scaffold340G49307 Striga asiatica
SGA_v2.0_scaffold62G21494 Striga asiatica
SMO174G0194 Selaginella moellendorffii
Solyc05g056280.2 Solanum lycopersicum
Sopen05g034670 Solanum pennellii
Sp6g26780 Schrenkiella parvula
TAR362G0304 Trochodendron aralioides
TAR633G1708 Trochodendron aralioides
THA.LOC104802907 Tarenaya hassleriana
THA.LOC104820847 Tarenaya hassleriana
Thecc.05G189300 Theobroma cacao
Thhalv10013707m.g Eutrema salsugineum
TPR.G33888 Trifolium pratense
TWI36G1378 Tripterygium wilfordii
unitig_26.g9576 Utricularia gibba
vmacro10414 Vaccinium macrocarpon
VMungo0464G1072 Vigna mungo
VMungo1383G0269 Vigna mungo
Zm00001eb064140 Zea mays
Zm00001eb210930 Zea mays
Zm00001eb246650 Zea mays

User provided reference genes

Program Settings