Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05020 Brassica napus
A03p61830 Brassica napus
A03p61840 Brassica napus
Aa31sc786G10 Aethionema arabicum
Actinidia33514 Actinidia chinensis
Actinidia33515 Actinidia chinensis
Actinidia39606 Actinidia chinensis
Ah.09g228850 Amaranthus hybridus
AL5G20110 Arabidopsis lyrata
AL7G18400 Arabidopsis lyrata
AL7G18410 Arabidopsis lyrata
Aqoxy7G04190 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.54PPAU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q7P4IG Arachis hypogaea
AT4G33150 Arabidopsis thaliana
ATR0099G092 Amborella trichopoda
ATR0721G130 Amborella trichopoda
Atru.chr7.1795 Acer truncatum
Atru.chr7.1797 Acer truncatum
AUR62025328 Chenopodium quinoa
AUR62028335 Chenopodium quinoa
BcaC09g52122 Brassica carinata
BcaNung02155 Brassica carinata
BolC1t00527H Brassica oleracea
BolC7t46395H Brassica oleracea
BolC7t46396H Brassica oleracea
BraA01t00484Z Brassica rapa
BraA03t15221Z Brassica rapa
BraA03t15222Z Brassica rapa
C01p05470 Brassica napus
C07p59510 Brassica napus
C07p59520 Brassica napus
CAN.G86.10 Capsicum annuum
CAN.G86.11 Capsicum annuum
CAN.G86.12 Capsicum annuum
CANSAT25G3628 Cannabis sativa
CANSAT56G1757 Cannabis sativa
CARHR241180 Cardamine hirsuta
Carub.0007s0730 Capsella rubella
Carub.0007s0731 Capsella rubella
Ca_21348_v3 Cicer arietinum L.
Cc00_g13770 Coffea canephora
Cc00_g13780 Coffea canephora
CDE05G0275 Ceratophyllum demersum
CDE05G0881 Ceratophyllum demersum
CDE05G2763 Ceratophyllum demersum
Cfa002929 Carpinus fangiana
Cfa023079 Carpinus fangiana
Ciclev10007313m.g Citrus clementina
Ciclev10008705m.g Citrus clementina
CiPaw.03G199300 Carya illinoinensis
ClCG03G014720 Citrullus lanatus
COL.COLO4_21183 Corchorus olitorius
Cpa.g.c48118 Carica papaya
Cpa.g.sc82.44 Carica papaya
CsaV3_1G041440 Cucumis sativus L.
CSS0027728 Camellia sinensis var. sinensis
DCAR_000446 Daucus carota
DCAR_011904 Daucus carota
Dinv25493 Davidia involucrata
Duzib150G0139 Durio zibethinus
Duzib168G0708 Durio zibethinus
Duzib168G0961 Durio zibethinus
ECA240G2250 Erigeron canadensis
EL10Ac8g18951 Beta vulgaris
EL10Ac8g18953 Beta vulgaris
EL10Ac8g19732 Beta vulgaris
Eucgr.C03183 Eucalyptus grandis
FAN19G0627 Fragaria x ananassa
FAN26G1461 Fragaria x ananassa
FAN26G2565 Fragaria x ananassa
FAN28G0237 Fragaria x ananassa
FvH4_1g09640 Fragaria vesca
Glyma.13G115500 Glycine max
Glyma.17G044300 Glycine max
Gohir.A06G082000 Gossypium hirsutum
Gohir.D06G081400 Gossypium hirsutum
Gorai.010G094700 Gossypium raimondii
GSVIVG01014998001 Vitis vinifera
HanXRQChr03g0060011 Helianthus annuus
Haze_26080 Corylus avellana
Haze_26708 Corylus avellana
Hma1.2p1_0179F.1_g079100 Hydrangea macrophylla
HPP92_009326 Vanilla planifolia
Hund08916 Selenicereus undatus
Lalb_Chr12g0200381 Lupinus albus
Lj4A923G18 Lonicera japonica
Lj4A923T26 Lonicera japonica
Lj4C923T7 Lonicera japonica
Lj4g0026986 Lotus japonicus
Lsat_1_v5_gn_5_138341 Lactuca sativa
Manes.16G088900 Manihot esculenta
Mapoly0072s0092 Marchantia polymorpha
Mapoly0074s0040 Marchantia polymorpha
MBI13_g01654_MAGBIO Magnolia biondii
MD02G1105000 Malus domestica
MD02G1105200 Malus domestica
MD02G1105300 Malus domestica
Medtr4g124470 Medicago truncatula
MELO3C015556.2 Cucumis melo
Migut.J00870 Erythranthe guttata
MSTRG.5977 Avicennia marina
Nitab4.5_0000055g0100 Nicotiana tabacum
Nitab4.5_0001114g0030 Nicotiana tabacum
Nn8g38508 Nelumbo nucifera
Oeu021231.1 Olea europaea
Os02g0783700 Oryza sativa ssp. japonica
Peaxi162Scf00452g00120 Petunia axillaris
PGR044G0871 Punica granatum
PGSC0003DMG400002301 Solanum tuberosum
PGSC0003DMG400002302 Solanum tuberosum
PGSC0003DMG401015935 Solanum tuberosum
PGSC0003DMG402015935 Solanum tuberosum
Phvul.003G126300 Phaseolus vulgaris
Potri.006G134300 Populus trichocarpa
Potri.006G134450 Populus trichocarpa
Pp3c27_7000 Physcomitrium patens
Prupe.6G271300 Prunus persica
Prupe.6G271400 Prunus persica
Prupe.7G189800 Prunus persica
Psat4g019880 Pisum sativum
PSO135G0314 Papaver somniferum
PSO135G0878 Papaver somniferum
PSO724G0241 Papaver somniferum
PSO724G0393 Papaver somniferum
QL11p003422 Quercus lobata
RcHm_v2.0_Chr2g0096481 Rosa chinensis
RcHm_v2.0_Chr2g0121231 Rosa chinensis
RcHm_v2.0_Chr2g0121241 Rosa chinensis
RcHm_v2.0_Chr2g0169881 Rosa chinensis
RcHm_v2.0_Chr2g0169891 Rosa chinensis
RcHm_v2.0_Chr5g0070481 Rosa chinensis
Rhsim05G0001300 Rhododendron simsii
Sabra06G0105400 Salix brachista
SalBow6G6057 Salvia bowleyana
Sc14g0000910 Simmondsia chinensis
Sed0024058 Sechium edule
SEGI_05824 Sequoiadendron giganteum
SEGI_06318 Sequoiadendron giganteum
SEGI_08338 Sequoiadendron giganteum
SEGI_37264 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12701 Striga asiatica
SMO145G0289 Selaginella moellendorffii
Solyc07g017610.3 Solanum lycopersicum
Solyc07g017660.3 Solanum lycopersicum
Solyc07g017670.3 Solanum lycopersicum
Solyc07g017675.1 Solanum lycopersicum
Sopen07g006460 Solanum pennellii
Sopen07g006480 Solanum pennellii
Sopen07g006500 Solanum pennellii
Sp7g30900 Schrenkiella parvula
TAR624G1053 Trochodendron aralioides
THA.LOC104804447 Tarenaya hassleriana
Thecc.09G068000 Theobroma cacao
Thecc.09G068400 Theobroma cacao
Thhalv10024287m.g Eutrema salsugineum
TPR.G12649 Trifolium pratense
TWI63G0157 Tripterygium wilfordii
TWI63G0842 Tripterygium wilfordii
unitig_22.g6576 Utricularia gibba
vmacro12815 Vaccinium macrocarpon
vmacro17070 Vaccinium macrocarpon
VMungo1215G1653 Vigna mungo
Zm00001eb048040 Zea mays
Zm00001eb048050 Zea mays
Zm00001eb129620 Zea mays
Zm00001eb129630 Zea mays
Zm00001eb192910 Zea mays
Zm00001eb257190 Zea mays

User provided reference genes

Program Settings