Gene: COL.COLO4_21183
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_21183
- Transcript Identifier COL.rna19939
- Gene Type Coding gene
- Location AWUE01017576.1 : 29231-36012 : negative
Gene Family Information
- ID HOM05D004198
- #Genes/#Species 169/94
- Phylogenetic origin
- ID ORTHO05D006470
- #Genes/#Species 142/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna19939
- GenBank OMO86412.1
- id gene21155
- gene_name COLO4_21183
- uniprot A0A1R3IV07
Descriptions
- Description Saccharopine dehydrogenase / Homospermidine synthase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019477 | ISO | PLAZA Integrative Orthology | L-lysine catabolic process | AT4G33150 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0047130 | ISO | PLAZA Integrative Orthology | saccharopine dehydrogenase (NADP+, L-lysine-forming) activity | AT4G33150 |
| GO:0004753 | ISO | PLAZA Integrative Orthology | saccharopine dehydrogenase activity | AT4G33150 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G33150 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G33150 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036291 | NAD(P)-binding domain superfamily |
| IPR007545 | LOR/SDH bifunctional enzyme, conserved domain |
| IPR032095 | Saccharopine dehydrogenase-like, C-terminal |
| IPR005097 | Saccharopine dehydrogenase, NADP binding domain |
| IPR043009 | LOR/SDH bifunctional enzyme, conserved domain superfamily |
| Mapman id | Description |
|---|---|
| 4.2.4.1 | Amino acid metabolism.degradation.lysine.bifunctional lysine ketoglutarate reductase and saccharopine dehydrogenase |