Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p26200 Brassica napus
A02p07130 Brassica napus
Aa31LG4G15580 Aethionema arabicum
Aa31LG8G9210 Aethionema arabicum
Aa31sc23G430 Aethionema arabicum
Actinidia07264 Actinidia chinensis
Actinidia24234 Actinidia chinensis
Actinidia37202 Actinidia chinensis
Ah.08g219540 Amaranthus hybridus
Ah.15g097420 Amaranthus hybridus
AL5G25450 Arabidopsis lyrata
AL8G35820 Arabidopsis lyrata
Aqoxy1G03565 Aquilegia oxysepala
Aqoxy4G00226 Aquilegia oxysepala
Aqoxy4G02933 Aquilegia oxysepala
Aqoxy7G03749 Aquilegia oxysepala
AT3G46580 Arabidopsis thaliana
AT5G59380 Arabidopsis thaliana
ATR0559G266 Amborella trichopoda
Atru.chr3.3912 Acer truncatum
AUR62001782 Chenopodium quinoa
AUR62009570 Chenopodium quinoa
BcaB01g04586 Brassica carinata
BcaB01g04590 Brassica carinata
BcaB05g22507 Brassica carinata
BcaB05g23553 Brassica carinata
BcaB08g36263 Brassica carinata
BcaC01g06528 Brassica carinata
BcaC03g14013 Brassica carinata
BcaC04g19780 Brassica carinata
BcaC09g49754 Brassica carinata
BolC1t03263H Brassica oleracea
BolC2t07349H Brassica oleracea
BolC3t13827H Brassica oleracea
BraA01t02543Z Brassica rapa
BraA02t05794Z Brassica rapa
BraA03t10485Z Brassica rapa
C01p33300 Brassica napus
C03p13790 Brassica napus
CAN.G1733.1 Capsicum annuum
CAN.G1733.2 Capsicum annuum
CAN.G1733.3 Capsicum annuum
CAN.G1733.4 Capsicum annuum
CAN.G1733.5 Capsicum annuum
CAN.G1733.6 Capsicum annuum
CAN.G745.23 Capsicum annuum
CAN.G745.24 Capsicum annuum
CAN.G745.25 Capsicum annuum
CAN.G745.26 Capsicum annuum
CAN.G745.27 Capsicum annuum
CANSAT54G1895 Cannabis sativa
CARHR155230 Cardamine hirsuta
CARHR264240 Cardamine hirsuta
CARHR264250 Cardamine hirsuta
CARHR285750 Cardamine hirsuta
Carub.0005s1285 Capsella rubella
Carub.0008s2005 Capsella rubella
Cc01_g08740 Coffea canephora
CDE02G2475 Ceratophyllum demersum
CDE08G1317 Ceratophyllum demersum
Cfa011508 Carpinus fangiana
Ciclev10029152m.g Citrus clementina
CiPaw.04G135700 Carya illinoinensis
CiPaw.13G093900 Carya illinoinensis
ClCG03G001470 Citrullus lanatus
COL.COLO4_18512 Corchorus olitorius
Cpa.g.sc81.141 Carica papaya
CsaV3_1G034280 Cucumis sativus L.
CSS0017255 Camellia sinensis var. sinensis
CSS0021452 Camellia sinensis var. sinensis
CSS0027943 Camellia sinensis var. sinensis
Dinv08914 Davidia involucrata
Dinv22804 Davidia involucrata
Duzib150G1353 Durio zibethinus
Duzib170G0106 Durio zibethinus
ECA240G3776 Erigeron canadensis
EL10Ac7g16022 Beta vulgaris
Eucgr.J02050 Eucalyptus grandis
FAN09G4791 Fragaria x ananassa
FAN11G2049 Fragaria x ananassa
FAN16G2398 Fragaria x ananassa
FAN21G2646 Fragaria x ananassa
FAN25G3130 Fragaria x ananassa
FvH4_3g36180 Fragaria vesca
Gohir.A05G095600 Gossypium hirsutum
Gohir.A13G227300 Gossypium hirsutum
Gohir.D05G095900 Gossypium hirsutum
Gohir.D07G103000 Gossypium hirsutum
Gohir.D13G232900 Gossypium hirsutum
Gorai.001G110900 Gossypium raimondii
Gorai.009G099200 Gossypium raimondii
Gorai.013G263700 Gossypium raimondii
GSVIVG01024953001 Vitis vinifera
GSVIVG01024954001 Vitis vinifera
HanXRQChr03g0089211 Helianthus annuus
HanXRQChr13g0419771 Helianthus annuus
Haze_12048 Corylus avellana
Haze_24100 Corylus avellana
Hma1.2p1_0220F.1_g093040 Hydrangea macrophylla
Hma1.2p1_1227F.1_g268580 Hydrangea macrophylla
Hund04953 Selenicereus undatus
Hund18906 Selenicereus undatus
Lj1P258T42 Lonicera japonica
Lsat_1_v5_gn_3_111560 Lactuca sativa
Manes.01G173632 Manihot esculenta
Mapoly0026s0046 Marchantia polymorpha
MBI05_g22031_MAGBIO Magnolia biondii
MD03G1092700 Malus domestica
MD11G1107500 Malus domestica
MELO3C020629.2 Cucumis melo
Migut.N02470 Erythranthe guttata
MSTRG.17696 Avicennia marina
Nitab4.5_0001135g0020 Nicotiana tabacum
Nitab4.5_0003516g0050 Nicotiana tabacum
Nn2g13344 Nelumbo nucifera
Oeu002348.1 Olea europaea
Oeu002349.1 Olea europaea
Oeu048854.1 Olea europaea
Peaxi162Scf00224g00513 Petunia axillaris
PGR119G1862 Punica granatum
PGSC0003DMG400006228 Solanum tuberosum
PGSC0003DMG400024415 Solanum tuberosum
PGSC0003DMG400024416 Solanum tuberosum
PGSC0003DMG400024773 Solanum tuberosum
PGSC0003DMG400026343 Solanum tuberosum
PGSC0003DMG400026344 Solanum tuberosum
PGSC0003DMG400030218 Solanum tuberosum
PGSC0003DMG400042312 Solanum tuberosum
PGSC0003DMG400044882 Solanum tuberosum
PGSC0003DMG400046053 Solanum tuberosum
Potri.001G240100 Populus trichocarpa
Potri.009G031100 Populus trichocarpa
Prupe.6G076700 Prunus persica
QL01p031797 Quercus lobata
RcHm_v2.0_Chr5g0064931 Rosa chinensis
Rhsim13G0195100 Rhododendron simsii
Sabra09G0021900 Salix brachista
SalBow3G0001 Salvia bowleyana
Sc21g0005810 Simmondsia chinensis
Sc24g0002450 Simmondsia chinensis
Sed0018693 Sechium edule
Sed0024869 Sechium edule
SEGI_09707 Sequoiadendron giganteum
SEGI_35246 Sequoiadendron giganteum
SGA_v2.0_scaffold177G39450 Striga asiatica
SGA_v2.0_scaffold295G47507 Striga asiatica
SHI05942 Sapria himalayana
Solyc09g018620.1 Solanum lycopersicum
Solyc10g049990.1 Solanum lycopersicum
Solyc11g068740.2 Solanum lycopersicum
Solyc11g150145.1 Solanum lycopersicum
Sopen00g012630 Solanum pennellii
Sopen01g043570 Solanum pennellii
Sopen10g021090 Solanum pennellii
Sopen10g021100 Solanum pennellii
Sopen11g027450 Solanum pennellii
Sp5g15120 Schrenkiella parvula
Sp6g21060 Schrenkiella parvula
TAR623G1294 Trochodendron aralioides
THA.LOC104810778 Tarenaya hassleriana
THA.LOC104814877 Tarenaya hassleriana
Thecc.09G321100 Theobroma cacao
Thhalv10002683m.g Eutrema salsugineum
Thhalv10014530m.g Eutrema salsugineum
TWI09G1536 Tripterygium wilfordii
TWI31G0561 Tripterygium wilfordii
TWI31G1174 Tripterygium wilfordii
TWI79G1380 Tripterygium wilfordii
unitig_8.g3659 Utricularia gibba

User provided reference genes

Program Settings