Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06930 Brassica napus
A02p27380 Brassica napus
A03p24220 Brassica napus
Aa31LG1G25070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4993 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5006 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2692 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2693 Anthoceros agrestis
Actinidia11308 Actinidia chinensis
Actinidia39857 Actinidia chinensis
Ah.07g204090 Amaranthus hybridus
AL4G42050 Arabidopsis lyrata
Aqoxy2G04112 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GESE75 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VAWH7V Arachis hypogaea
AT2G43370 Arabidopsis thaliana
ATR0174G040 Amborella trichopoda
Atru.chr1.1118 Acer truncatum
AUR62002598 Chenopodium quinoa
AUR62030020 Chenopodium quinoa
BcaB01g03389 Brassica carinata
BcaB06g29308 Brassica carinata
BcaC01g04465 Brassica carinata
BcaC01g05235 Brassica carinata
BcaC02g07185 Brassica carinata
BcaC02g07186 Brassica carinata
BcaC02g08533 Brassica carinata
BcaC02g08695 Brassica carinata
BcaC03g15410 Brassica carinata
BcaC03g15872 Brassica carinata
BcaC05g26338 Brassica carinata
BcaC05g28297 Brassica carinata
BcaC06g36151 Brassica carinata
BcaC07g37614 Brassica carinata
BcaC07g37616 Brassica carinata
BcaNung01479 Brassica carinata
BolC1t00980H Brassica oleracea
BolC2t09639H Brassica oleracea
BolC2t11974H Brassica oleracea
BolC3t15244H Brassica oleracea
BolC3t16254H Brassica oleracea
BolC4t26743H Brassica oleracea
BolC4t28541H Brassica oleracea
BolC5t31068H Brassica oleracea
BolC6t35221H Brassica oleracea
BolC6t38965H Brassica oleracea
BolC7t41139H Brassica oleracea
BraA01t00641Z Brassica rapa
BraA01t01167Z Brassica rapa
BraA02t07766Z Brassica rapa
BraA03t11631Z Brassica rapa
BraA03t12690Z Brassica rapa
BraA06t26553Z Brassica rapa
C02p36260 Brassica napus
C03p28850 Brassica napus
C04p51630 Brassica napus
C04p70380 Brassica napus
C05p23560 Brassica napus
C06p00790 Brassica napus
C07p07200 Brassica napus
CANSAT78G0391 Cannabis sativa
CARHR138450 Cardamine hirsuta
Carub.0004s2583 Capsella rubella
CBR_g19868 Chara braunii
Cc00_g01450 Coffea canephora
Cc00_g17580 Coffea canephora
Cc00_g19080 Coffea canephora
Cc03_g15010 Coffea canephora
CDE02G0576 Ceratophyllum demersum
Cfa015770 Carpinus fangiana
Ciclev10013958m.g Citrus clementina
Ciclev10020999m.g Citrus clementina
Ciclev10021004m.g Citrus clementina
CiPaw.01G102400 Carya illinoinensis
ClCG05G007160 Citrullus lanatus
COL.COLO4_14420 Corchorus olitorius
Cpa.g.sc2713.1 Carica papaya
CsaV3_3G015860 Cucumis sativus L.
CSS0008998 Camellia sinensis var. sinensis
Dinv44240 Davidia involucrata
Duzib093G1865 Durio zibethinus
ECA248G1660 Erigeron canadensis
EL10Ac3g06299 Beta vulgaris
Eucgr.H00407 Eucalyptus grandis
Eucgr.H00408 Eucalyptus grandis
Eucgr.H00409 Eucalyptus grandis
Eucgr.H00411 Eucalyptus grandis
Eucgr.H00412 Eucalyptus grandis
Eucgr.L01383 Eucalyptus grandis
FAN07G2475 Fragaria x ananassa
FAN12G0511 Fragaria x ananassa
FAN22G0324 Fragaria x ananassa
FvH4_4g12800 Fragaria vesca
Glyma.08G366200 Glycine max
Glyma.18G296100 Glycine max
Gohir.A09G168800 Gossypium hirsutum
Gohir.D09G164500 Gossypium hirsutum
Gorai.006G186300 Gossypium raimondii
GSVIVG01010733001 Vitis vinifera
HanXRQChr16g0502641 Helianthus annuus
Haze_00731 Corylus avellana
Hma1.2p1_2974F.1_g331120 Hydrangea macrophylla
HPP92_002778 Vanilla planifolia
HPP92_028240 Vanilla planifolia
Hund12229 Selenicereus undatus
Lalb_Chr17g0335931 Lupinus albus
Lj1g0005305 Lotus japonicus
Lj8C30T5 Lonicera japonica
Lsat_1_v5_gn_1_71660 Lactuca sativa
Manes.04G040300 Manihot esculenta
Mapoly0009s0012 Marchantia polymorpha
MBI08_g01805_MAGBIO Magnolia biondii
MD03G1203000 Malus domestica
MD04G1022600 Malus domestica
Medtr7g082150 Medicago truncatula
MELO3C006785.2 Cucumis melo
Migut.N02002 Erythranthe guttata
Migut.O00710 Erythranthe guttata
MSTRG.27998 Avicennia marina
Nitab4.5_0000697g0030 Nicotiana tabacum
Nitab4.5_0010182g0010 Nicotiana tabacum
Nitab4.5_0015880g0010 Nicotiana tabacum
Nitab4.5_0016448g0010 Nicotiana tabacum
Nn6g32161 Nelumbo nucifera
Oeu005457.1 Olea europaea
Oeu027735.1 Olea europaea
Oeu028250.1 Olea europaea
Os09g0513700 Oryza sativa ssp. japonica
Peaxi162Scf00286g00334 Petunia axillaris
Peaxi162Scf00416g00215 Petunia axillaris
PGR142G1978 Punica granatum
PGSC0003DMG400021605 Solanum tuberosum
Phvul.008G006500 Phaseolus vulgaris
Potri.017G033400 Populus trichocarpa
Pp3c12_15180 Physcomitrium patens
Prupe.1G172700 Prunus persica
Psat3g098520 Pisum sativum
PSO017G0653 Papaver somniferum
PSO675G5023 Papaver somniferum
QL10p047503 Quercus lobata
RcHm_v2.0_Chr4g0412221 Rosa chinensis
RcHm_v2.0_Chr4g0412301 Rosa chinensis
Rhsim02G0075900 Rhododendron simsii
Sabra17G0021000 Salix brachista
SalBow3G0935 Salvia bowleyana
Sc25g0001640 Simmondsia chinensis
Sed0021283 Sechium edule
SEGI_04703 Sequoiadendron giganteum
SGA_v2.0_scaffold81G26074 Striga asiatica
SHI29165 Sapria himalayana
SMO167G0082 Selaginella moellendorffii
SMO347G0366 Selaginella moellendorffii
Solyc09g098390.3 Solanum lycopersicum
Sopen09g036320 Solanum pennellii
Sp4g25470 Schrenkiella parvula
TAR633G0480 Trochodendron aralioides
TAR633G1202 Trochodendron aralioides
TAR633G2111 Trochodendron aralioides
TAR633G2752 Trochodendron aralioides
THA.LOC104802303 Tarenaya hassleriana
Thecc.05G003100 Theobroma cacao
Thhalv10001559m.g Eutrema salsugineum
TPR.G29080 Trifolium pratense
TWI12G1326 Tripterygium wilfordii
unitig_26.g9981 Utricularia gibba
vmacro15642 Vaccinium macrocarpon
VMungo1309G2522 Vigna mungo
VMungo1383G1615 Vigna mungo
Zm00001eb318310 Zea mays

User provided reference genes

Program Settings