Gene: Pp3c12_15180

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c12_15180
  • Transcript Identifier Pp3c12_15180V3.4
  • Gene Type Coding gene
  • Location Chr12 : 10160776-10164263 : positive

Gene Family Information

  • ID HOM05D004170
  • #Genes/#Species 169/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c12_15180V3.4
  • pacid 32974483
  • alias Phpat.012G057100
  • alias Pp1s70_106V6
  • alias Phypa_78228
  • uniprot A9SEC3

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0017069
IBA
GOA DatabasesnRNA binding
GO:0003729
IBA
GOA DatabasemRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G43370

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005689
IBA
GOA DatabaseU12-type spliceosomal complex
GO:0034693
ISO
PLAZA Integrative OrthologyU11/U12 snRNP AT2G43370

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR034146 snRNP35, RNA recognition motif
Mapman id Description
16.2.4.1.1 RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.U11 small nuclear ribonucleoprotein particle (snRNP).protein factor (U11-35K)