Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p06670 Brassica napus
Aa31LG11G15290 Aethionema arabicum
Aa31sc84G60 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis
Actinidia09406 Actinidia chinensis
Actinidia33332 Actinidia chinensis
Actinidia35769 Actinidia chinensis
Ah.09g231680 Amaranthus hybridus
AL6G25270 Arabidopsis lyrata
Aqoxy5G03802 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea
AT5G14520 Arabidopsis thaliana
ATR1132G032 Amborella trichopoda
Atru.chr6.2388 Acer truncatum
AUR62029204 Chenopodium quinoa
AUR62033049 Chenopodium quinoa
AUR62040778 Chenopodium quinoa
AUR62040779 Chenopodium quinoa
BcaB01g05107 Brassica carinata
BcaB01g05108 Brassica carinata
BolC3t13270H Brassica oleracea
BraA03t10001Z Brassica rapa
C03p07700 Brassica napus
CAN.G1819.1 Capsicum annuum
CANSAT64G2890 Cannabis sativa
CARHR198790 Cardamine hirsuta
Carub.0006s1270 Capsella rubella
Ca_02925_v3 Cicer arietinum L.
Ca_15743_v3 Cicer arietinum L.
Ca_22754_v3 Cicer arietinum L.
Ca_26485_v3 Cicer arietinum L.
Ca_31061_v3 Cicer arietinum L.
CBR_g38896 Chara braunii
Cc07_g01750 Coffea canephora
CDE06G0546 Ceratophyllum demersum
CDE07G0971 Ceratophyllum demersum
Cfa007372 Carpinus fangiana
Cfa027221 Carpinus fangiana
Ciclev10014699m.g Citrus clementina
CiPaw.03G043300 Carya illinoinensis
CiPaw.04G028300 Carya illinoinensis
ClCG01G013750 Citrullus lanatus
ClCG11G000220 Citrullus lanatus
COL.COLO4_29105 Corchorus olitorius
Cpa.g.sc108.65 Carica papaya
Cre16.g683793 Chlamydomonas reinhardtii
CsaV3_1G014060 Cucumis sativus L.
CSS0048893 Camellia sinensis var. sinensis
DCAR_021719 Daucus carota
Dinv33444 Davidia involucrata
Dinv35104 Davidia involucrata
Duzib187G0134 Durio zibethinus
Duzib264G0191 Durio zibethinus
ECA240G1354 Erigeron canadensis
ECA248G2726 Erigeron canadensis
EL10Ac8g19455 Beta vulgaris
Eucgr.I01748 Eucalyptus grandis
FAN11G1291 Fragaria x ananassa
FAN16G1867 Fragaria x ananassa
FAN21G3616 Fragaria x ananassa
FAN25G3844 Fragaria x ananassa
FvH4_3g26080 Fragaria vesca
Glyma.03G234900 Glycine max
Glyma.19G232500 Glycine max
Gohir.A07G222900 Gossypium hirsutum
Gohir.D06G181800 Gossypium hirsutum
Gohir.D07G229600 Gossypium hirsutum
Gohir.D13G037150 Gossypium hirsutum
Gorai.001G264700 Gossypium raimondii
Gorai.013G041700 Gossypium raimondii
GSVIVG01032412001 Vitis vinifera
HanXRQChr04g0114031 Helianthus annuus
HanXRQChr05g0138871 Helianthus annuus
HanXRQChr14g0462651 Helianthus annuus
Haze_14736 Corylus avellana
Haze_26879 Corylus avellana
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla
HPP92_005716 Vanilla planifolia
Hund22314 Selenicereus undatus
Lalb_Chr02g0160481 Lupinus albus
Lalb_Chr06g0175751 Lupinus albus
Lj1g0017236 Lotus japonicus
Lj2g0001382 Lotus japonicus
Lj7C599T6 Lonicera japonica
LjContig00272g0012452 Lotus japonicus
Lsat_1_v5_gn_2_51000 Lactuca sativa
Lsat_1_v5_gn_4_179560 Lactuca sativa
Manes.17G112500 Manihot esculenta
Mapoly0138s0023 Marchantia polymorpha
MBI16_g23841_MAGBIO Magnolia biondii
MCO04G526 Micromonas commoda
MD09G1027600 Malus domestica
MD10G1043900 Malus domestica
MD13G1107200 Malus domestica
MD17G1027600 Malus domestica
Medtr6g022550 Medicago truncatula
Medtr6g022570 Medicago truncatula
Medtr6g022580 Medicago truncatula
Medtr6g022610 Medicago truncatula
Medtr7g100040 Medicago truncatula
Medtr8g010330 Medicago truncatula
MELO3C004873.2 Cucumis melo
Migut.B00156 Erythranthe guttata
Migut.N01406 Erythranthe guttata
MSTRG.20029 Avicennia marina
Nitab4.5_0003930g0060 Nicotiana tabacum
Nitab4.5_0006221g0020 Nicotiana tabacum
Nitab4.5_0008375g0010 Nicotiana tabacum
Nitab4.5_0008375g0030 Nicotiana tabacum
Nn3g16747 Nelumbo nucifera
Oeu048622.3 Olea europaea
Os03g0699200 Oryza sativa ssp. japonica
Peaxi162Scf00700g00427 Petunia axillaris
PGR142G2553 Punica granatum
PGSC0003DMG400006122 Solanum tuberosum
Phvul.007G070900 Phaseolus vulgaris
Potri.004G121400 Populus trichocarpa
Pp3c3_23250 Physcomitrium patens
PRCOL_00002170 Prasinoderma coloniale
Prupe.3G291100 Prunus persica
Prupe.4G071200 Prunus persica
Prupe.8G015200 Prunus persica
Prupe.8G015700 Prunus persica
Psat0s1782g0040 Pisum sativum
Psat1g081880 Pisum sativum
PSO017G2175 Papaver somniferum
PSO478G0945 Papaver somniferum
PSO675G5574 Papaver somniferum
PSO764G0137 Papaver somniferum
QL02p074797 Quercus lobata
RcHm_v2.0_Chr5g0047391 Rosa chinensis
RcHm_v2.0_Chr5g0047691 Rosa chinensis
RcHm_v2.0_Chr5g0047861 Rosa chinensis
Rhsim10G0017800 Rhododendron simsii
Sabra04G0067000 Salix brachista
SalBow6G0855 Salvia bowleyana
Sc03g0007490 Simmondsia chinensis
Sc03g0007500 Simmondsia chinensis
Sc03g0007510 Simmondsia chinensis
Sed0001839 Sechium edule
Sed0003581 Sechium edule
SEGI_01298 Sequoiadendron giganteum
SEGI_02382 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13248 Striga asiatica
SMO356G0182 Selaginella moellendorffii
Solyc07g047670.3 Solanum lycopersicum
Sopen07g024120 Solanum pennellii
Sp6g29490 Schrenkiella parvula
TAR371G0318 Trochodendron aralioides
TAR629G3285 Trochodendron aralioides
TAR636G1761 Trochodendron aralioides
THA.LOC104822401 Tarenaya hassleriana
THA.LOC104824006 Tarenaya hassleriana
Thecc.04G016700 Theobroma cacao
Thhalv10013046m.g Eutrema salsugineum
TPR.G1071 Trifolium pratense
TPR.G27000 Trifolium pratense
TWI56G0312 Tripterygium wilfordii
unitig_21.g20810 Utricularia gibba
vmacro05861 Vaccinium macrocarpon
VMungo0720G1997 Vigna mungo
Zm00001eb053920 Zea mays
Zm00001eb053940 Zea mays
Zm00001eb053960 Zea mays

User provided reference genes

Program Settings