Gene: Pp3c3_23250

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c3_23250
  • Transcript Identifier Pp3c3_23250V3.1
  • Gene Type Coding gene
  • Location Chr03 : 15885621-15887408 : negative

Gene Family Information

  • ID HOM05D004159
  • #Genes/#Species 170/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c3_23250V3.1
  • pacid 32942429
  • alias Phpat.003G090800
  • alias Pp1s47_85V6
  • alias Phypa_31350
  • uniprot A0A2K1KVN8

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000232
IEA
GOA Databaseregulation of rRNA processing
GO:0000463
IBA
IEA
GOA Databasematuration of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0042254
IEA
InterProribosome biogenesis
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0000466
IEA
GOA Databasematuration of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0042273
IEA
GOA Databaseribosomal large subunit biogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G14520
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0043021
IEA
GOA Databaseribonucleoprotein complex binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005654
IEA
GOA Databasenucleoplasm
GO:0070545
IBA
GOA DatabasePeBoW complex
GO:0005730
IEA
GOA Databasenucleolus
GO:0005730
IEA
InterPronucleolus
GO:0005634
IEA
GOA Databasenucleus
GO:0030687
IEA
GOA Databasepreribosome, large subunit precursor

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010613 Pescadillo
IPR036420 BRCT domain superfamily
IPR001357 BRCT domain
Mapman id Description
17.1.2.2.1.10.1 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.PES-BOP1-WDR12 (PeBoW) complex.component PES