Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p21000 Brassica napus
A04p29140 Brassica napus
A05p08010 Brassica napus
Aa31LG5G23180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5042 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5043 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5961 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2845 Anthoceros agrestis
Actinidia26746 Actinidia chinensis
Actinidia26780 Actinidia chinensis
Actinidia35394 Actinidia chinensis
Actinidia37158 Actinidia chinensis
Ah.14g087130 Amaranthus hybridus
AL4G34970 Arabidopsis lyrata
Aqoxy2G02204 Aquilegia oxysepala
Aqoxy6G01405 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FDU8BE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KP5LKI Arachis hypogaea
AT2G37990 Arabidopsis thaliana
ATR0730G095 Amborella trichopoda
Atru.chr7.1220 Acer truncatum
Atru.chr7.278 Acer truncatum
AUR62011120 Chenopodium quinoa
AUR62013371 Chenopodium quinoa
BcaB01g03735 Brassica carinata
BcaB02g09228 Brassica carinata
BcaC01g05579 Brassica carinata
BcaC02g11940 Brassica carinata
BcaC02g11942 Brassica carinata
BcaC02g12926 Brassica carinata
BcaC09g49789 Brassica carinata
BcaNung06017 Brassica carinata
BcaNung06338 Brassica carinata
BcaNung06518 Brassica carinata
BolC3t14862H Brassica oleracea
BolC4t22574H Brassica oleracea
BolC4t28140H Brassica oleracea
BraA03t11339Z Brassica rapa
BraA04t18383Z Brassica rapa
BraA05t19767Z Brassica rapa
C01p32910 Brassica napus
C03p24670 Brassica napus
C03p24730 Brassica napus
C04p09670 Brassica napus
C04p66350 Brassica napus
CAN.G594.20 Capsicum annuum
CANSAT11G1878 Cannabis sativa
CARHR132550 Cardamine hirsuta
Carub.0004s1996 Capsella rubella
Ca_00137_v3 Cicer arietinum L.
CBR_g18768 Chara braunii
Cc06_g08630 Coffea canephora
CDE04G1546 Ceratophyllum demersum
Cfa002719 Carpinus fangiana
Ciclev10008881m.g Citrus clementina
CiPaw.07G232300 Carya illinoinensis
CiPaw.15G031800 Carya illinoinensis
ClCG03G013780 Citrullus lanatus
ClCG06G011000 Citrullus lanatus
COL.COLO4_05789 Corchorus olitorius
Cpa.g.sc1199.3 Carica papaya
Cre01.g020950 Chlamydomonas reinhardtii
CsaV3_1G042300 Cucumis sativus L.
CSS0011304 Camellia sinensis var. sinensis
DCAR_014878 Daucus carota
DCAR_017823 Daucus carota
Dinv36535 Davidia involucrata
Duzib150G1332 Durio zibethinus
ECA247G0053 Erigeron canadensis
EL10Ac8g18639 Beta vulgaris
Eucgr.E02428 Eucalyptus grandis
FAN19G1880 Fragaria x ananassa
FAN23G0721 Fragaria x ananassa
FAN26G1774 Fragaria x ananassa
FAN28G2743 Fragaria x ananassa
FvH4_1g03500 Fragaria vesca
Glyma.02G155902 Glycine max
Glyma.13G167900 Glycine max
Glyma.17G115500 Glycine max
Glyma.20G228801 Glycine max
Gohir.A05G017100 Gossypium hirsutum
Gohir.A07G035500 Gossypium hirsutum
Gohir.A08G014600 Gossypium hirsutum
Gohir.D05G018000 Gossypium hirsutum
Gohir.D07G039500 Gossypium hirsutum
Gohir.D08G025232 Gossypium hirsutum
Gohir.D10G134433 Gossypium hirsutum
Gorai.001G041600 Gossypium raimondii
Gorai.009G018400 Gossypium raimondii
GSVIVG01027072001 Vitis vinifera
GSVIVG01027422001 Vitis vinifera
HanXRQChr06g0181321 Helianthus annuus
HanXRQChr06g0181331 Helianthus annuus
HanXRQChr07g0187411 Helianthus annuus
Haze_24995 Corylus avellana
Hma1.2p1_0018F.1_g012530 Hydrangea macrophylla
HPP92_015694 Vanilla planifolia
Hund09135 Selenicereus undatus
Lalb_Chr07g0178901 Lupinus albus
Lalb_Chr12g0197861 Lupinus albus
Lj4g0019515 Lotus japonicus
Lj7C630T1 Lonicera japonica
Lsat_1_v5_gn_9_120581 Lactuca sativa
Manes.14G131500 Manihot esculenta
Mapoly0036s0028 Marchantia polymorpha
MBI01_g37801_MAGBIO Magnolia biondii
MCO03G226 Micromonas commoda
MD02G1034000 Malus domestica
MD07G1185400 Malus domestica
MD15G1174800 Malus domestica
Medtr2g008870 Medicago truncatula
MELO3C015663.2 Cucumis melo
Migut.L01695 Erythranthe guttata
MSTRG.12622 Avicennia marina
Nitab4.5_0002556g0050 Nicotiana tabacum
Nitab4.5_0005139g0050 Nicotiana tabacum
Nitab4.5_0010819g0030 Nicotiana tabacum
Nn8g39422 Nelumbo nucifera
Nn8g39426 Nelumbo nucifera
Oeu045226.1 Olea europaea
Oeu055874.1 Olea europaea
Os04g0685100 Oryza sativa ssp. japonica
Os06g0142050 Oryza sativa ssp. japonica
Peaxi162Scf00274g00336 Petunia axillaris
PGR102G0554 Punica granatum
PGSC0003DMG400018964 Solanum tuberosum
Phvul.003G163900 Phaseolus vulgaris
Phvul.009G258100 Phaseolus vulgaris
Potri.005G231000 Populus trichocarpa
Pp3c3_32550 Physcomitrium patens
PRCOL_00002162 Prasinoderma coloniale
Prupe.7G241100 Prunus persica
Psat2g006920 Pisum sativum
PSO210G0875 Papaver somniferum
PSO832G0272 Papaver somniferum
QL02p088083 Quercus lobata
RcHm_v2.0_Chr2g0088711 Rosa chinensis
Rhsim03G0247600 Rhododendron simsii
Rhsim11G0147700 Rhododendron simsii
Sabra05G0178400 Salix brachista
SalBow5G0058 Salvia bowleyana
Sc14g0000240 Simmondsia chinensis
Sc18g0000640 Simmondsia chinensis
Sed0019954 Sechium edule
Sed0021765 Sechium edule
SEGI_31652 Sequoiadendron giganteum
SGA_v2.0_scaffold224G42948 Striga asiatica
SGA_v2.0_scaffold35G14133 Striga asiatica
SMO351G0347 Selaginella moellendorffii
Solyc12g006550.2 Solanum lycopersicum
Sopen12g002500 Solanum pennellii
Sp4g20310 Schrenkiella parvula
TAR383G1033 Trochodendron aralioides
TAR625G0545 Trochodendron aralioides
TAR626G0974 Trochodendron aralioides
TAR626G1412 Trochodendron aralioides
THA.LOC104805714 Tarenaya hassleriana
THA.LOC104806527 Tarenaya hassleriana
Thecc.09G124800 Theobroma cacao
Thhalv10016958m.g Eutrema salsugineum
TPR.G25243 Trifolium pratense
TWI32G0547 Tripterygium wilfordii
TWI34G0257 Tripterygium wilfordii
unitig_21.g20656 Utricularia gibba
vmacro22115 Vaccinium macrocarpon
VMungo1215G1862 Vigna mungo
VMungo1309G1108 Vigna mungo
Zm00001eb060690 Zea mays
Zm00001eb122260 Zea mays
Zm00001eb337040 Zea mays

User provided reference genes

Program Settings