Gene: Solyc12g006550.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g006550.2
  • Transcript Identifier Solyc12g006550.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 1066042-1070257 : positive

Gene Family Information

  • ID HOM05D004156
  • #Genes/#Species 170/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g006550.2.1
  • uniprot A0A3Q7J212
  • gene_id Solyc12g006550

Descriptions

  • Description Ribosome biogenesis regulatory protein (AHRD V3.3 *** A0A2G2YU70_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0042254
IEA
InterProribosome biogenesis
GO:0042273
IBA
GOA Databaseribosomal large subunit biogenesis
GO:0000055
IBA
GOA Databaseribosomal large subunit export from nucleus
GO:0000447
IBA
GOA Databaseendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0030687
IBA
GOA Databasepreribosome, large subunit precursor
GO:0005730
IBA
GOA Databasenucleolus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007023 Ribosomal biogenesis regulatory protein
Mapman id Description
17.1.2.2.1.11.2 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.ARPF2-ARRS1 assembly complex.component ARRS1