Gene: AT2G37990
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G37990
- Transcript Identifier AT2G37990.1
- Gene Type Coding gene
- Location Chr2 : 15900713-15903028 : positive
Gene Family Information
- ID HOM05D004156
- #Genes/#Species 170/99
- Phylogenetic origin
- ID ORTHO05D005259
- #Genes/#Species 161/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G37990.1
- uniprot Q9SH88
Descriptions
- Description ribosome biogenesis regulatory protein (RRS1) family protein
- Computational description ribosome biogenesis regulatory protein (RRS1) family protein; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis regulatory protein (InterPro:IPR007023); Has 425 Blast hits to 423 proteins in 207 species: Archae - 1; Bacteria - 2; Metazoa - 151; Fungi - 137; Plants - 58; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042273 | IBA | Gene Ontology | ribosomal large subunit biogenesis | 1 |
| GO:0000447 | IBA | Gene Ontology | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1 |
| GO:0000055 | IBA | Gene Ontology | ribosomal large subunit export from nucleus | 1 |
| GO:0042254 | IEA | GOA Database | ribosome biogenesis | |
| GO:0042254 | IEA | InterPro | ribosome biogenesis |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0005730 | IDA | GOA Database | nucleolus | |
| GO:0005730 | HDA IBA | Gene Ontology | nucleolus | 1 2 |
| GO:0030687 | IBA | Gene Ontology | preribosome, large subunit precursor | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007023 | Ribosomal biogenesis regulatory protein |
| Mapman id | Description |
|---|---|
| 17.1.2.2.1.11.2 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.ARPF2-ARRS1 assembly complex.component ARRS1 |