Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15110 Brassica napus
A09p28160 Brassica napus
Aa31LG5G23780 Aethionema arabicum
Aa31LG6G7020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3685 Anthoceros agrestis
Actinidia12320 Actinidia chinensis
AL2G19760 Arabidopsis lyrata
AL6G14170 Arabidopsis lyrata
AL6G45220 Arabidopsis lyrata
AL7G29550 Arabidopsis lyrata
Aqoxy7G00145 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1D56YB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y783I6 Arachis hypogaea
AT4G11080 Arabidopsis thaliana
AT4G23800 Arabidopsis thaliana
ATR0594G018 Amborella trichopoda
ATR1100G049 Amborella trichopoda
Atru.chr2.763 Acer truncatum
Atru.chr7.2469 Acer truncatum
Atru.chr9.2030 Acer truncatum
Atru.chr9.2037 Acer truncatum
AUR62010814 Chenopodium quinoa
AUR62019814 Chenopodium quinoa
BcaB01g00238 Brassica carinata
BcaB01g00239 Brassica carinata
BcaB01g01584 Brassica carinata
BcaC04g21100 Brassica carinata
BcaC08g42892 Brassica carinata
BcaC09g50947 Brassica carinata
BcaNung01086 Brassica carinata
BolC1t01827H Brassica oleracea
BolC6t35252H Brassica oleracea
BolC9t56405H Brassica oleracea
BraA01t01449Z Brassica rapa
BraA09t38379Z Brassica rapa
C01p19010 Brassica napus
C06p01160 Brassica napus
C09p35690 Brassica napus
CAN.G532.100 Capsicum annuum
CANSAT21G2399 Cannabis sativa
CARHR231190 Cardamine hirsuta
CARHR255520 Cardamine hirsuta
Carub.0006s2985 Capsella rubella
Carub.0007s1732 Capsella rubella
Ca_12802_v3 Cicer arietinum L.
Ca_17492_v3 Cicer arietinum L.
Ca_19297_v3 Cicer arietinum L.
CBR_g34702 Chara braunii
Cc08_g15820 Coffea canephora
CDE03G0409 Ceratophyllum demersum
CDE04G1588 Ceratophyllum demersum
Cfa012835 Carpinus fangiana
Ciclev10023918m.g Citrus clementina
CiPaw.11G123500 Carya illinoinensis
ClCG07G014910 Citrullus lanatus
COL.COLO4_21713 Corchorus olitorius
Cpa.g.sc122.41 Carica papaya
Cre16.g672300 Chlamydomonas reinhardtii
CsaV3_4G006440 Cucumis sativus L.
CSS0011943 Camellia sinensis var. sinensis
CSS0017125 Camellia sinensis var. sinensis
CSS0019694 Camellia sinensis var. sinensis
CSS0023347 Camellia sinensis var. sinensis
CSS0026293 Camellia sinensis var. sinensis
CSS0027886 Camellia sinensis var. sinensis
CSS0031879 Camellia sinensis var. sinensis
DCAR_027717 Daucus carota
Duzib068G1416 Durio zibethinus
Duzib183G0002 Durio zibethinus
Duzib205G2047 Durio zibethinus
ECA234G2690 Erigeron canadensis
EL10Ac5g12892 Beta vulgaris
Eucgr.E00847 Eucalyptus grandis
FAN04G1279 Fragaria x ananassa
FAN04G2754 Fragaria x ananassa
FAN08G1247 Fragaria x ananassa
FAN13G2696 Fragaria x ananassa
FAN18G0035 Fragaria x ananassa
FAN18G2617 Fragaria x ananassa
FvH4_5g04120 Fragaria vesca
Glyma.01G060600 Glycine max
Glyma.05G215500 Glycine max
Glyma.08G021700 Glycine max
Gohir.A11G024000 Gossypium hirsutum
Gohir.D11G023700 Gossypium hirsutum
Gorai.007G025500 Gossypium raimondii
GSVIVG01019504001 Vitis vinifera
HanXRQChr17g0535161 Helianthus annuus
Haze_08653 Corylus avellana
Hund11402 Selenicereus undatus
Lalb_Chr05g0224221 Lupinus albus
Lj4g0021447 Lotus japonicus
Lj8A210T88 Lonicera japonica
Lsat_1_v5_gn_3_10260 Lactuca sativa
Manes.02G012100 Manihot esculenta
Manes.17G117281 Manihot esculenta
Mapoly0026s0138 Marchantia polymorpha
MBI07_g24338_MAGBIO Magnolia biondii
MCO16G025 Micromonas commoda
MD06G1103000 Malus domestica
MD14G1121900 Malus domestica
Medtr8g099305 Medicago truncatula
MELO3C016306.2 Cucumis melo
Migut.A00676 Erythranthe guttata
MSTRG.25659 Avicennia marina
Nitab4.5_0000223g0250 Nicotiana tabacum
Nitab4.5_0010205g0030 Nicotiana tabacum
Nn3g19070 Nelumbo nucifera
Oeu061093.1 Olea europaea
Os02g0258200 Oryza sativa ssp. japonica
Os02g0258250 Oryza sativa ssp. japonica
Os07g0597400 Oryza sativa ssp. japonica
Peaxi162Scf00074g01143 Petunia axillaris
Peaxi162Scf00168g01736 Petunia axillaris
Peaxi162Scf00168g01737 Petunia axillaris
PGR042G2687 Punica granatum
PGSC0003DMG400012086 Solanum tuberosum
PGSC0003DMG400012298 Solanum tuberosum
Phvul.002G296700 Phaseolus vulgaris
Potri.001G093700 Populus trichocarpa
Potri.003G138000 Populus trichocarpa
Pp3c11_8530 Physcomitrium patens
Pp3c7_20570 Physcomitrium patens
Prupe.5G115800 Prunus persica
Psat7g026240 Pisum sativum
PSO063G0915 Papaver somniferum
PSO135G0371 Papaver somniferum
PSO339G6280 Papaver somniferum
PSO384G3063 Papaver somniferum
PSO729G0146 Papaver somniferum
QL02p031322 Quercus lobata
RcHm_v2.0_Chr7g0195371 Rosa chinensis
Rhsim07G0083500 Rhododendron simsii
Sabra01G0069600 Salix brachista
Sabra05G0040500 Salix brachista
Sabra10G0054600 Salix brachista
Sabra11G0120200 Salix brachista
Sabra13G0046900 Salix brachista
Sabra17G0001600 Salix brachista
Sabra17G0084800 Salix brachista
Sabra19G0042900 Salix brachista
SabraUnG0000800 Salix brachista
SalBow1G2286 Salvia bowleyana
SalBow1G6205 Salvia bowleyana
Sc07g0009970 Simmondsia chinensis
Sed0012262 Sechium edule
Sed0017887 Sechium edule
SEGI_07912 Sequoiadendron giganteum
SEGI_25080 Sequoiadendron giganteum
SEGI_34551 Sequoiadendron giganteum
SGA_v2.0_scaffold173G39085 Striga asiatica
SMO367G1063 Selaginella moellendorffii
Solyc08g082070.3 Solanum lycopersicum
Sopen08g030360 Solanum pennellii
Sp6g06370 Schrenkiella parvula
Sp7g21760 Schrenkiella parvula
TAR374G1070 Trochodendron aralioides
THA.LOC104806434 Tarenaya hassleriana
Thecc.03G293700 Theobroma cacao
Thhalv10015680m.g Eutrema salsugineum
Thhalv10025168m.g Eutrema salsugineum
Thhalv10028648m.g Eutrema salsugineum
TPR.G3381 Trifolium pratense
TWI60G1238 Tripterygium wilfordii
unitig_32.g11609 Utricularia gibba
unitig_748.g7416 Utricularia gibba
vmacro13908 Vaccinium macrocarpon
VMungo0112G0002 Vigna mungo
VMungo0251G3674 Vigna mungo
Zm00001eb238060 Zea mays

User provided reference genes

Program Settings