Gene: Sopen08g030360

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g030360
  • Transcript Identifier Sopen08g030360.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 69583749-69586609 : positive

Gene Family Information

  • ID HOM05D004154
  • #Genes/#Species 170/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g030360.1

Descriptions

  • Description HMG (high mobility group) box protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | LOCATED IN: nucleus, chloroplast | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: High mobility group, superfamily , High mobility group, HMG1/HMG2 | BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein .
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000793
ISO
PLAZA Integrative Orthologycondensed chromosome AT4G23800
GO:0000794
ISO
PLAZA Integrative Orthologycondensed nuclear chromosome AT4G23800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036910 High mobility group box domain superfamily
IPR009071 High mobility group box domain
IPR044601 3xHMG-box protein HMGB6/HMGB13
Mapman id Description
12.1.3.1 Chromatin organisation.chromatin structure.DNA bending.architectural protein (HMG-B)