Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p19330 Brassica napus
A04p26610 Brassica napus
A09p35780 Brassica napus
Aa31LG10G6460 Aethionema arabicum
Aa31LG6G11870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis
Actinidia25200 Actinidia chinensis
Actinidia31378 Actinidia chinensis
Actinidia32352 Actinidia chinensis
Ah.11g045310 Amaranthus hybridus
AL1G44690 Arabidopsis lyrata
Aqoxy6G00202 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea
AT1G30630 Arabidopsis thaliana
AT2G34840 Arabidopsis thaliana
ATR0763G246 Amborella trichopoda
Atru.chr6.3256 Acer truncatum
AUR62011277 Chenopodium quinoa
AUR62027344 Chenopodium quinoa
AUR62037847 Chenopodium quinoa
AUR62042515 Chenopodium quinoa
AUR62044460 Chenopodium quinoa
BcaB06g28829 Brassica carinata
BcaB07g32703 Brassica carinata
BcaC01g05751 Brassica carinata
BcaC02g07752 Brassica carinata
BcaC05g27087 Brassica carinata
BolC3t14655H Brassica oleracea
BolC4t27879H Brassica oleracea
BolC5t31698H Brassica oleracea
BraA03t11189Z Brassica rapa
BraA04t18166Z Brassica rapa
BraA09t39101Z Brassica rapa
C03p22580 Brassica napus
C04p64030 Brassica napus
C05p29690 Brassica napus
CAN.G675.30 Capsicum annuum
CANSAT35G0477 Cannabis sativa
CARHR030110 Cardamine hirsuta
Carub.0001s2889 Capsella rubella
Carub.0004s1652 Capsella rubella
Ca_00931_v3 Cicer arietinum L.
CBR_g34668 Chara braunii
Cc09_g07090 Coffea canephora
CDE02G1412 Ceratophyllum demersum
CDE06G2577 Ceratophyllum demersum
Cfa000762 Carpinus fangiana
Cfa026260 Carpinus fangiana
Ciclev10016127m.g Citrus clementina
CiPaw.09G148400 Carya illinoinensis
ClCG01G025420 Citrullus lanatus
COL.COLO4_26892 Corchorus olitorius
COL.COLO4_29004 Corchorus olitorius
COL.COLO4_38325 Corchorus olitorius
Cpa.g.sc285.5 Carica papaya
Cre13.g592450 Chlamydomonas reinhardtii
CsaV3_6G052670 Cucumis sativus L.
CSS0024113 Camellia sinensis var. sinensis
CSS0034299 Camellia sinensis var. sinensis
DCAR_003828 Daucus carota
DCAR_007807 Daucus carota
Dinv04216 Davidia involucrata
Duzib160G0522 Durio zibethinus
Duzib235G1539 Durio zibethinus
EL10Ac8g19524 Beta vulgaris
Eucgr.D01026 Eucalyptus grandis
FAN16G1287 Fragaria x ananassa
FAN21G1456 Fragaria x ananassa
FAN25G0882 Fragaria x ananassa
FvH4_3g11400 Fragaria vesca
Glyma.09G030400 Glycine max
Glyma.15G136100 Glycine max
Gohir.A02G088700 Gossypium hirsutum
Gohir.A05G111900 Gossypium hirsutum
Gohir.D02G104900 Gossypium hirsutum
Gohir.D05G112400 Gossypium hirsutum
Gorai.005G119100 Gossypium raimondii
Gorai.009G116600 Gossypium raimondii
GSVIVG01021747001 Vitis vinifera
HanXRQChr04g0119201 Helianthus annuus
HanXRQChr11g0340901 Helianthus annuus
Haze_08569 Corylus avellana
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla
HPP92_013200 Vanilla planifolia
Lalb_Chr20g0120301 Lupinus albus
Lj1A1156T44 Lonicera japonica
Lj2A337T32 Lonicera japonica
Lj6g0020585 Lotus japonicus
Lsat_1_v5_gn_1_86700 Lactuca sativa
Lsat_1_v5_gn_7_31180 Lactuca sativa
Manes.06G053900 Manihot esculenta
Manes.14G126900 Manihot esculenta
Mapoly0002s0056 Marchantia polymorpha
MBI18_g26296_MAGBIO Magnolia biondii
MCO11G236 Micromonas commoda
MD05G1263700 Malus domestica
MD08G1091900 Malus domestica
MD10G1241400 Malus domestica
Medtr2g032130 Medicago truncatula
MELO3C007042.2 Cucumis melo
Migut.M01941 Erythranthe guttata
MSTRG.16319 Avicennia marina
MSTRG.7569 Avicennia marina
Nitab4.5_0001219g0030 Nicotiana tabacum
Nitab4.5_0012414g0010 Nicotiana tabacum
Nn4g26687 Nelumbo nucifera
Nn7g38349 Nelumbo nucifera
Oeu052702.4 Olea europaea
Oeu060331.1 Olea europaea
Os04g0612600 Oryza sativa ssp. japonica
Os04g0644700 Oryza sativa ssp. japonica
Peaxi162Scf00195g00518 Petunia axillaris
PGR083G2348 Punica granatum
PGSC0003DMG400021137 Solanum tuberosum
PGSC0003DMG400031401 Solanum tuberosum
Phvul.006G122500 Phaseolus vulgaris
Potri.011G155800 Populus trichocarpa
Pp3c16_16890 Physcomitrium patens
Pp3c27_2170 Physcomitrium patens
Pp3c6_18240 Physcomitrium patens
PRCOL_00001868 Prasinoderma coloniale
Prupe.4G101800 Prunus persica
Psat1g164080 Pisum sativum
PSO541G2415 Papaver somniferum
PSO675G0864 Papaver somniferum
QL05p064858 Quercus lobata
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis
RcHm_v2.0_Chr1g0337861 Rosa chinensis
RcHm_v2.0_Chr5g0018341 Rosa chinensis
RcHm_v2.0_Chr6g0289621 Rosa chinensis
RcHm_v2.0_Chr6g0289631 Rosa chinensis
Rhsim02G0165800 Rhododendron simsii
Sabra11G0144000 Salix brachista
SalBow8G1631 Salvia bowleyana
SalBow8G2729 Salvia bowleyana
Sc24g0002580 Simmondsia chinensis
Sed0006315 Sechium edule
Sed0027064 Sechium edule
SGA_v2.0_scaffold147G36336 Striga asiatica
SGA_v2.0_scaffold147G36337 Striga asiatica
SGA_v2.0_scaffold298G47640 Striga asiatica
SMO358G0532 Selaginella moellendorffii
Solyc02g030243.1 Solanum lycopersicum
Solyc02g069585.1 Solanum lycopersicum
Sopen02g009560 Solanum pennellii
Sopen02g018720 Solanum pennellii
Sp1g26530 Schrenkiella parvula
Sp4g17120 Schrenkiella parvula
TAR627G0684 Trochodendron aralioides
TAR629G2923 Trochodendron aralioides
THA.LOC104798582 Tarenaya hassleriana
THA.LOC104814339 Tarenaya hassleriana
Thecc.06G007200 Theobroma cacao
Thecc.06G007700 Theobroma cacao
Thhalv10008349m.g Eutrema salsugineum
Thhalv10017028m.g Eutrema salsugineum
TPR.G8030 Trifolium pratense
TWI15G0841 Tripterygium wilfordii
TWI38G0133 Tripterygium wilfordii
TWI81G0788 Tripterygium wilfordii
unitig_748.g7354 Utricularia gibba
vmacro03457 Vaccinium macrocarpon
vmacro10993 Vaccinium macrocarpon
VMungo0540G1545 Vigna mungo
Zm00001eb135420 Zea mays
Zm00001eb180170 Zea mays
Zm00001eb274480 Zea mays
Zm00001eb373640 Zea mays
Zm00001eb430730 Zea mays
Zm00001eb432010 Zea mays

User provided reference genes

Program Settings