Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03010 Brassica napus
A10p23490 Brassica napus
Aa31LG11G14160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.219 Anthoceros agrestis
Actinidia17574 Actinidia chinensis
Actinidia17575 Actinidia chinensis
Actinidia26244 Actinidia chinensis
Ah.12g062550 Amaranthus hybridus
Ah.12g062560 Amaranthus hybridus
AL1G40200 Arabidopsis lyrata
AL6G26260 Arabidopsis lyrata
Aqoxy3G00661 Aquilegia oxysepala
Aqoxy3G00662 Aquilegia oxysepala
Aqoxy3G01362 Aquilegia oxysepala
Aqoxy3G03559 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JWLU7F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M1DWNQ Arachis hypogaea
AT5G15400 Arabidopsis thaliana
ATR0111G012 Amborella trichopoda
Atru.chr8.371 Acer truncatum
AUR62018140 Chenopodium quinoa
AUR62034478 Chenopodium quinoa
BcaC03g13414 Brassica carinata
BcaC04g24243 Brassica carinata
BcaNung03312 Brassica carinata
BolC2t06699H Brassica oleracea
BolC9t59011H Brassica oleracea
BraA02t05272Z Brassica rapa
BraA10t44416Z Brassica rapa
C02p07680 Brassica napus
C09p61720 Brassica napus
CAN.G111.24 Capsicum annuum
CAN.G206.195 Capsicum annuum
CANSAT64G2358 Cannabis sativa
CARHR197910 Cardamine hirsuta
Carub.0006s1357 Capsella rubella
Ca_04866_v3 Cicer arietinum L.
CBR_g12108 Chara braunii
CBR_g12111 Chara braunii
Cc07_g03830 Coffea canephora
CDE04G3780 Ceratophyllum demersum
Cfa007620 Carpinus fangiana
Ciclev10010958m.g Citrus clementina
CiPaw.03G091800 Carya illinoinensis
ClCG10G015430 Citrullus lanatus
COL.COLO4_07430 Corchorus olitorius
Cpa.g.sc14.139 Carica papaya
Cre09.g398350 Chlamydomonas reinhardtii
CsaV3_3G041070 Cucumis sativus L.
CSS0030715 Camellia sinensis var. sinensis
DCAR_011063 Daucus carota
Dinv11490 Davidia involucrata
Dinv33806 Davidia involucrata
Duzib147G0424 Durio zibethinus
Duzib264G1228 Durio zibethinus
ECA232G0495 Erigeron canadensis
EL10Ac2g03047 Beta vulgaris
Eucgr.I01989 Eucalyptus grandis
FAN02G1010 Fragaria x ananassa
FAN05G0837 Fragaria x ananassa
FAN09G1300 Fragaria x ananassa
FAN09G3106 Fragaria x ananassa
FAN09G4205 Fragaria x ananassa
FAN11G2920 Fragaria x ananassa
FAN12G4053 Fragaria x ananassa
FAN14G3940 Fragaria x ananassa
FAN16G0041 Fragaria x ananassa
FAN16G0481 Fragaria x ananassa
FAN16G3124 Fragaria x ananassa
FAN17G0761 Fragaria x ananassa
FAN21G0296 Fragaria x ananassa
FAN21G1132 Fragaria x ananassa
FAN21G1378 Fragaria x ananassa
FAN25G2854 Fragaria x ananassa
FvH4_3g25920 Fragaria vesca
FvH4_3g25930 Fragaria vesca
FvH4_6g47550 Fragaria vesca
Glyma.13G059200 Glycine max
Glyma.19G027200 Glycine max
Gohir.A09G012200 Gossypium hirsutum
Gohir.D09G011100 Gossypium hirsutum
Gorai.006G012900 Gossypium raimondii
GSVIVG01011484001 Vitis vinifera
HanXRQChr09g0264141 Helianthus annuus
HanXRQChr15g0488441 Helianthus annuus
Haze_14475 Corylus avellana
Hma1.2p1_0037F.1_g023840 Hydrangea macrophylla
Hma1.2p1_0604F.1_g187770 Hydrangea macrophylla
Hma1.2p1_1813F.1_g303850 Hydrangea macrophylla
HPP92_023626 Vanilla planifolia
Lalb_Chr21g0318471 Lupinus albus
Lj2g0025037 Lotus japonicus
Lj4C115G25 Lonicera japonica
Lju41A7G39 Lonicera japonica
Lsat_1_v5_gn_0_45261 Lactuca sativa
Lsat_1_v5_gn_1_20041 Lactuca sativa
Lsat_1_v5_gn_4_170201 Lactuca sativa
Lsat_1_v5_gn_8_41201 Lactuca sativa
Lsat_1_v5_gn_8_41221 Lactuca sativa
Manes.01G099400 Manihot esculenta
Mapoly0052s0078 Marchantia polymorpha
MBI19_g32361_MAGBIO Magnolia biondii
MCO05G368 Micromonas commoda
MD09G1060800 Malus domestica
MD17G1056200 Malus domestica
Medtr6g013690 Medicago truncatula
MELO3C009839.2 Cucumis melo
Migut.H00657 Erythranthe guttata
MSTRG.23904 Avicennia marina
Nitab4.5_0000565g0080 Nicotiana tabacum
Nitab4.5_0008573g0070 Nicotiana tabacum
Nn4g23336 Nelumbo nucifera
Oeu034757.1 Olea europaea
Oeu045355.1 Olea europaea
Os03g0427900 Oryza sativa ssp. japonica
Peaxi162Scf00166g00825 Petunia axillaris
PGR004G0109 Punica granatum
PGSC0003DMG400001440 Solanum tuberosum
PGSC0003DMG400007132 Solanum tuberosum
Phvul.004G033100 Phaseolus vulgaris
Potri.004G121200 Populus trichocarpa
Potri.017G089600 Populus trichocarpa
Pp3c15_20630 Physcomitrium patens
PRCOL_00002499 Prasinoderma coloniale
Prupe.3G259400 Prunus persica
Psat1g069040 Pisum sativum
Psat1g069080 Pisum sativum
Psat1g069120 Pisum sativum
PSO013G0369 Papaver somniferum
PSO017G4845 Papaver somniferum
PSO063G3309 Papaver somniferum
PSO144G0082 Papaver somniferum
PSO144G0086 Papaver somniferum
PSO170G0544 Papaver somniferum
PSO325G0009 Papaver somniferum
PSO384G2573 Papaver somniferum
PSO478G4129 Papaver somniferum
PSO675G1667 Papaver somniferum
PSO761G0054 Papaver somniferum
QL02p039361 Quercus lobata
QL02p039609 Quercus lobata
QL02p039616 Quercus lobata
RcHm_v2.0_Chr2g0166651 Rosa chinensis
RcHm_v2.0_Chr5g0047221 Rosa chinensis
Rhsim08G0073200 Rhododendron simsii
Sabra17G0078900 Salix brachista
Sc10g0003320 Simmondsia chinensis
Sed0005067 Sechium edule
SEGI_13711 Sequoiadendron giganteum
SGA_v2.0_scaffold413G51160 Striga asiatica
SGA_v2.0_scaffold4G02415 Striga asiatica
SHI16441 Sapria himalayana
SMO356G0406 Selaginella moellendorffii
Solyc02g088550.4 Solanum lycopersicum
Solyc06g074770.4 Solanum lycopersicum
Sopen02g033270 Solanum pennellii
Sopen06g031210 Solanum pennellii
Sp6g28690 Schrenkiella parvula
TAR622G0429 Trochodendron aralioides
TAR629G1084 Trochodendron aralioides
THA.LOC104822346 Tarenaya hassleriana
Thecc.04G090300 Theobroma cacao
Thhalv10012542m.g Eutrema salsugineum
TPR.G26216 Trifolium pratense
TWI34G1118 Tripterygium wilfordii
TWI60G1537 Tripterygium wilfordii
unitig_744.g24002 Utricularia gibba
vmacro18164 Vaccinium macrocarpon
VMungo0464G1725 Vigna mungo
Zm00001eb020370 Zea mays
Zm00001eb393280 Zea mays

User provided reference genes

Program Settings