Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p13830 Brassica napus
Aa31LG3G11690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1314 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1317 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.570 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1427 Anthoceros agrestis
Actinidia05004 Actinidia chinensis
Actinidia07861 Actinidia chinensis
Actinidia07863 Actinidia chinensis
Actinidia30403 Actinidia chinensis
AL77U10010 Arabidopsis lyrata
AL8G31340 Arabidopsis lyrata
Aqoxy4G02289 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.PC7QSD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V7V5NB Arachis hypogaea
AT5G55760 Arabidopsis thaliana
ATR0691G219 Amborella trichopoda
Atru.chr2.3690 Acer truncatum
Atru.chr5.3346 Acer truncatum
Atru.chr6.3401 Acer truncatum
AUR62017106 Chenopodium quinoa
AUR62036459 Chenopodium quinoa
BcaB01g04371 Brassica carinata
BcaB01g04374 Brassica carinata
BcaC01g06391 Brassica carinata
BolC3t14049H Brassica oleracea
BraA03t10686Z Brassica rapa
C03p16270 Brassica napus
CAN.G623.3 Capsicum annuum
CANSAT11G1558 Cannabis sativa
CARHR269070 Cardamine hirsuta
CARHR269090 Cardamine hirsuta
Carub.0008s1614 Capsella rubella
Ca_22143_v3 Cicer arietinum L.
CBR_g41558 Chara braunii
CBR_g42169 Chara braunii
CBR_g46413 Chara braunii
CBR_g70742 Chara braunii
Cc00_g16050 Coffea canephora
CDE10G0035 Ceratophyllum demersum
CDE10G0306 Ceratophyllum demersum
Cfa020190 Carpinus fangiana
Cfa021802 Carpinus fangiana
Cfa025152 Carpinus fangiana
Cfa026528 Carpinus fangiana
Ciclev10008206m.g Citrus clementina
Ciclev10017468m.g Citrus clementina
CiPaw.11G204100 Carya illinoinensis
CiPaw.12G138300 Carya illinoinensis
ClCG09G021370 Citrullus lanatus
COL.COLO4_09834 Corchorus olitorius
Cpa.g.sc12.139 Carica papaya
Cpa.g.sc12.142 Carica papaya
Cre10.g462200 Chlamydomonas reinhardtii
CsaV3_7G011360 Cucumis sativus L.
CSS0003811 Camellia sinensis var. sinensis
CSS0020645 Camellia sinensis var. sinensis
CSS0030605 Camellia sinensis var. sinensis
CSS0033695 Camellia sinensis var. sinensis
CSS0037338 Camellia sinensis var. sinensis
CSS0043319 Camellia sinensis var. sinensis
CSS0050447 Camellia sinensis var. sinensis
DCAR_019676 Daucus carota
Dinv21305 Davidia involucrata
Dinv40861 Davidia involucrata
Duzib170G0622 Durio zibethinus
Duzib213G0942 Durio zibethinus
ECA240G0272 Erigeron canadensis
ECA246G0435 Erigeron canadensis
EL10Ac4g07564 Beta vulgaris
EL10Ac9g22672 Beta vulgaris
Eucgr.F02047 Eucalyptus grandis
FAN11G2140 Fragaria x ananassa
FAN16G2423 Fragaria x ananassa
FAN16G2922 Fragaria x ananassa
FAN21G3724 Fragaria x ananassa
FAN25G3398 Fragaria x ananassa
FvH4_3g29170 Fragaria vesca
Glyma.08G330200 Glycine max
Glyma.18G076300 Glycine max
Gohir.A13G132700 Gossypium hirsutum
Gohir.D13G136100 Gossypium hirsutum
Gorai.013G152600 Gossypium raimondii
GSVIVG01014688001 Vitis vinifera
HanXRQChr03g0075041 Helianthus annuus
HanXRQChr05g0160111 Helianthus annuus
HanXRQChr15g0472961 Helianthus annuus
Haze_09826 Corylus avellana
Haze_26165 Corylus avellana
Hma1.2p1_1402F.1_g281120 Hydrangea macrophylla
HPP92_018200 Vanilla planifolia
HPP92_018245 Vanilla planifolia
HPP92_018246 Vanilla planifolia
Hund06463 Selenicereus undatus
Lalb_Chr15g0082141 Lupinus albus
Lalb_Chr15g0082151 Lupinus albus
Lj1A797G65 Lonicera japonica
Lj1A890G48 Lonicera japonica
Lj6g0008173 Lotus japonicus
Lj6g0015560 Lotus japonicus
Lsat_1_v5_gn_5_1860 Lactuca sativa
Lsat_1_v5_gn_9_103601 Lactuca sativa
Manes.03G141400 Manihot esculenta
Mapoly0037s0047 Marchantia polymorpha
MBI14_g08099_MAGBIO Magnolia biondii
MCO04G032 Micromonas commoda
MCO09G442 Micromonas commoda
MCO09G505 Micromonas commoda
MD03G1179400 Malus domestica
MD11G1199100 Malus domestica
Medtr3g460800 Medicago truncatula
MELO3C024942.2 Cucumis melo
Migut.M01651 Erythranthe guttata
MSTRG.15796 Avicennia marina
MSTRG.18470 Avicennia marina
Nitab4.5_0002736g0050 Nicotiana tabacum
Nitab4.5_0009777g0010 Nicotiana tabacum
Nn1g07514 Nelumbo nucifera
Oeu005958.1 Olea europaea
Oeu037219.1 Olea europaea
Oeu053982.1 Olea europaea
Os04g0271000 Oryza sativa ssp. japonica
Peaxi162Scf00139g01322 Petunia axillaris
PGR083G2215 Punica granatum
PGSC0003DMG400022278 Solanum tuberosum
Phvul.006G057700 Phaseolus vulgaris
Potri.001G368100 Populus trichocarpa
Pp3c10_16280 Physcomitrium patens
Pp3c19_11620 Physcomitrium patens
Pp3c3_24240 Physcomitrium patens
PRCOL_00001731 Prasinoderma coloniale
PRCOL_00004819 Prasinoderma coloniale
PRCOL_00006128 Prasinoderma coloniale
PRCOL_00006737 Prasinoderma coloniale
Prupe.4G243700 Prunus persica
Psat5g167680 Pisum sativum
PSO541G4137 Papaver somniferum
PSO675G6166 Papaver somniferum
QL04p068062 Quercus lobata
QL08p004112 Quercus lobata
RcHm_v2.0_Chr5g0053471 Rosa chinensis
Rhsim06G0177100 Rhododendron simsii
Rhsim06G0229800 Rhododendron simsii
Sabra16G0241200 Salix brachista
SalBow8G0562 Salvia bowleyana
Sc03g0011310 Simmondsia chinensis
Sc03g0011390 Simmondsia chinensis
Sc21g0000570 Simmondsia chinensis
Sed0001626 Sechium edule
SEGI_18003 Sequoiadendron giganteum
SEGI_32632 Sequoiadendron giganteum
SGA_v2.0_scaffold171G38864 Striga asiatica
SHI10165 Sapria himalayana
SHI10166 Sapria himalayana
SMO139G0017 Selaginella moellendorffii
SMO234G0037 Selaginella moellendorffii
Solyc07g065550.3 Solanum lycopersicum
Sopen07g033750 Solanum pennellii
Sp6g17670 Schrenkiella parvula
TAR629G0286 Trochodendron aralioides
THA.LOC104811666 Tarenaya hassleriana
Thecc.07G013500 Theobroma cacao
Thhalv10013461m.g Eutrema salsugineum
TPR.G24129 Trifolium pratense
TPR.G796 Trifolium pratense
TWI38G1679 Tripterygium wilfordii
unitig_747.g21638 Utricularia gibba
vmacro11590 Vaccinium macrocarpon
vmacro12077 Vaccinium macrocarpon
VMungo0540G0291 Vigna mungo
Zm00001eb425070 Zea mays
Zm00001eb425080 Zea mays

User provided reference genes

Program Settings