Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p00310 Brassica napus
A09p13930 Brassica napus
Aa31LG8G17390 Aethionema arabicum
Actinidia09529 Actinidia chinensis
Actinidia25803 Actinidia chinensis
Actinidia30141 Actinidia chinensis
Ah.03g147720 Amaranthus hybridus
AL3G53400 Arabidopsis lyrata
Aqoxy2G03706 Aquilegia oxysepala
Aqoxy7G03385 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.TE5CG8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZVPG3A Arachis hypogaea
AT2G20420 Arabidopsis thaliana
ATR0736G150 Amborella trichopoda
Atru.chr5.1778 Acer truncatum
AUR62003546 Chenopodium quinoa
AUR62017860 Chenopodium quinoa
BcaB03g16833 Brassica carinata
BcaB07g31587 Brassica carinata
BcaB08g34906 Brassica carinata
BcaC04g22683 Brassica carinata
BcaC06g36729 Brassica carinata
BolC7t40509H Brassica oleracea
BolC9t54570H Brassica oleracea
BraA07t27822Z Brassica rapa
BraA09t37039Z Brassica rapa
C07p00650 Brassica napus
C09p16710 Brassica napus
CAN.G771.36 Capsicum annuum
CANSAT01G1551 Cannabis sativa
CARHR110970 Cardamine hirsuta
Carub.0003s3481 Capsella rubella
Ca_09660_v3 Cicer arietinum L.
CBR_g26489 Chara braunii
Cc01_g18040 Coffea canephora
CDE02G1941 Ceratophyllum demersum
CDE05G0056 Ceratophyllum demersum
Ciclev10020300m.g Citrus clementina
CiPaw.03G130300 Carya illinoinensis
CiPaw.03G267900 Carya illinoinensis
CiPaw.04G188500 Carya illinoinensis
ClCG06G001530 Citrullus lanatus
COL.COLO4_34373 Corchorus olitorius
Cpa.g.sc165.34 Carica papaya
Cpa.g.sc165.35 Carica papaya
Cre17.g703700 Chlamydomonas reinhardtii
CsaV3_6G007490 Cucumis sativus L.
CSS0014309 Camellia sinensis var. sinensis
CSS0040446 Camellia sinensis var. sinensis
DCAR_018503 Daucus carota
Dinv08643 Davidia involucrata
Dinv16374 Davidia involucrata
Dinv18296 Davidia involucrata
Dinv34652 Davidia involucrata
Duzib138G0603 Durio zibethinus
Duzib211G0126 Durio zibethinus
ECA236G0129 Erigeron canadensis
EL10Ac6g15333 Beta vulgaris
Eucgr.H00143 Eucalyptus grandis
FAN15G2391 Fragaria x ananassa
FAN20G1240 Fragaria x ananassa
FAN24G2352 Fragaria x ananassa
FAN27G2583 Fragaria x ananassa
FvH4_2g20990 Fragaria vesca
FvH4_2g21030 Fragaria vesca
Glyma.10G039000 Glycine max
Glyma.13G125400 Glycine max
Glyma.18G157500 Glycine max
Gohir.A07G150500 Gossypium hirsutum
Gohir.A07G150600 Gossypium hirsutum
Gohir.D07G156900 Gossypium hirsutum
Gohir.D07G157000 Gossypium hirsutum
Gorai.001G179900 Gossypium raimondii
Gorai.001G180000 Gossypium raimondii
GSVIVG01028373001 Vitis vinifera
HanXRQChr04g0111281 Helianthus annuus
HanXRQChr10g0280751 Helianthus annuus
HanXRQChr10g0293611 Helianthus annuus
HanXRQChr15g0475161 Helianthus annuus
Haze_24666 Corylus avellana
Haze_24671 Corylus avellana
Haze_26746 Corylus avellana
Haze_26747 Corylus avellana
Haze_27401 Corylus avellana
Hma1.2p1_0273F.1_g109400 Hydrangea macrophylla
HPP92_008549 Vanilla planifolia
Hund04389 Selenicereus undatus
Lalb_Chr02g0152651 Lupinus albus
Lalb_Chr06g0170611 Lupinus albus
Lalb_Chr21g0314011 Lupinus albus
Lalb_Chr21g0314021 Lupinus albus
Lalb_Chr21g0314031 Lupinus albus
Lj1A71T65 Lonicera japonica
Lj2A1145G31 Lonicera japonica
Lj2C1145T6 Lonicera japonica
Lj2C1146T3 Lonicera japonica
Lj5g0009759 Lotus japonicus
Lsat_1_v5_gn_8_92300 Lactuca sativa
Lsat_1_v5_gn_9_10741 Lactuca sativa
Manes.12G034800 Manihot esculenta
Manes.13G037000 Manihot esculenta
Mapoly0005s0186 Marchantia polymorpha
MBI07_g31081_MAGBIO Magnolia biondii
MBI07_g32831_MAGBIO Magnolia biondii
MBI10_g13790_MAGBIO Magnolia biondii
MBI10_g27626_MAGBIO Magnolia biondii
MBI10_g27857_MAGBIO Magnolia biondii
MCO01G516 Micromonas commoda
MD05G1193100 Malus domestica
MD10G1179600 Malus domestica
Medtr1g069645 Medicago truncatula
MELO3C022382.2 Cucumis melo
Migut.D00454 Erythranthe guttata
Migut.N02218 Erythranthe guttata
MSTRG.18338 Avicennia marina
MSTRG.21476 Avicennia marina
Nitab4.5_0000917g0090 Nicotiana tabacum
Nitab4.5_0001919g0010 Nicotiana tabacum
Nitab4.5_0003295g0070 Nicotiana tabacum
Nn1g02862 Nelumbo nucifera
Nn3g19723 Nelumbo nucifera
Oeu035732.1 Olea europaea
Oeu055792.1 Olea europaea
Os02g0621700 Oryza sativa ssp. japonica
Peaxi162Scf00013g01239 Petunia axillaris
Peaxi162Scf00415g00213 Petunia axillaris
PGR031G0590 Punica granatum
PGSC0003DMG400020149 Solanum tuberosum
Phvul.007G190800 Phaseolus vulgaris
Potri.002G259600 Populus trichocarpa
Potri.014G195700 Populus trichocarpa
Pp3c20_5640 Physcomitrium patens
PRCOL_00006943 Prasinoderma coloniale
Prupe.8G219400 Prunus persica
Psat3g074720 Pisum sativum
Psat6g062440 Pisum sativum
Psat7g041920 Pisum sativum
PSO210G2341 Papaver somniferum
PSO832G3765 Papaver somniferum
QL09p040223 Quercus lobata
QL09p040238 Quercus lobata
RcHm_v2.0_Chr6g0287371 Rosa chinensis
Rhsim01G0261700 Rhododendron simsii
Rhsim13G0038000 Rhododendron simsii
Sabra02G0197500 Salix brachista
Sabra14G0145900 Salix brachista
SalBow4G2771 Salvia bowleyana
SalBow6G2566 Salvia bowleyana
Sc16g0004880 Simmondsia chinensis
Sed0019801 Sechium edule
Sed0026875 Sechium edule
SEGI_32315 Sequoiadendron giganteum
SGA_v2.0_scaffold138G35202 Striga asiatica
SMO201G0240 Selaginella moellendorffii
Solyc06g083790.3 Solanum lycopersicum
Sopen06g035200 Solanum pennellii
Sp3g33640 Schrenkiella parvula
TAR365G0472 Trochodendron aralioides
TAR365G0842 Trochodendron aralioides
TAR636G3081 Trochodendron aralioides
THA.LOC104804042 Tarenaya hassleriana
THA.LOC104820071 Tarenaya hassleriana
Thecc.01G253900 Theobroma cacao
Thhalv10001996m.g Eutrema salsugineum
TPR.G5690 Trifolium pratense
TWI12G1332 Tripterygium wilfordii
TWI18G0319 Tripterygium wilfordii
unitig_22.g5450 Utricularia gibba
vmacro02694 Vaccinium macrocarpon
vmacro14809 Vaccinium macrocarpon
VMungo0720G0501 Vigna mungo
Zm00001eb185030 Zea mays
Zm00001eb247500 Zea mays
Zm00001eb277730 Zea mays
Zm00001eb283930 Zea mays

User provided reference genes

Program Settings