Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p33250 Brassica napus
Aa31LG8G3420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.567 Anthoceros agrestis
Actinidia08998 Actinidia chinensis
Actinidia09000 Actinidia chinensis
Actinidia21699 Actinidia chinensis
Actinidia32709 Actinidia chinensis
Actinidia32710 Actinidia chinensis
Actinidia39149 Actinidia chinensis
Actinidia39150 Actinidia chinensis
Ah.01g005620 Amaranthus hybridus
Ah.01g021840 Amaranthus hybridus
AL3G29010 Arabidopsis lyrata
Aqoxy7G01498 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8U94IH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QE1TJP Arachis hypogaea
AT3G16270 Arabidopsis thaliana
ATR0705G117 Amborella trichopoda
Atru.chr1.3467 Acer truncatum
AUR62022169 Chenopodium quinoa
AUR62031875 Chenopodium quinoa
BcaB06g25717 Brassica carinata
BcaC05g28900 Brassica carinata
BolC5t33775H Brassica oleracea
BraA05t22150Z Brassica rapa
C05p50240 Brassica napus
CAN.G60.5 Capsicum annuum
CANSAT56G4226 Cannabis sativa
CARHR091480 Cardamine hirsuta
Carub.0003s1602 Capsella rubella
Ca_11524_v3 Cicer arietinum L.
CBR_g25753 Chara braunii
CBR_g31940 Chara braunii
CBR_g36315 Chara braunii
Cc00_g10390 Coffea canephora
CDE02G3541 Ceratophyllum demersum
CDE02G4060 Ceratophyllum demersum
CDE08G1118 Ceratophyllum demersum
Cfa002115 Carpinus fangiana
Ciclev10027380m.g Citrus clementina
CiPaw.01G233700 Carya illinoinensis
CiPaw.02G147500 Carya illinoinensis
ClCG07G013220 Citrullus lanatus
COL.COLO4_30474 Corchorus olitorius
Cpa.g.sc109.33 Carica papaya
Cre12.g545150 Chlamydomonas reinhardtii
Cre12.g545300 Chlamydomonas reinhardtii
Cre17.g715176 Chlamydomonas reinhardtii
CsaV3_3G023750 Cucumis sativus L.
CSS0032416 Camellia sinensis var. sinensis
CSS0042187 Camellia sinensis var. sinensis
CSS0043166 Camellia sinensis var. sinensis
DCAR_019957 Daucus carota
Dinv30461 Davidia involucrata
Dinv38000 Davidia involucrata
Duzib235G0154 Durio zibethinus
ECA248G2833 Erigeron canadensis
EL10Ac9g22110 Beta vulgaris
Eucgr.F03056 Eucalyptus grandis
Eucgr.J02949 Eucalyptus grandis
FAN02G0974 Fragaria x ananassa
FAN05G2434 Fragaria x ananassa
FAN09G2208 Fragaria x ananassa
FAN14G0476 Fragaria x ananassa
FAN18G0014 Fragaria x ananassa
FvH4_5g23151 Fragaria vesca
FvH4_6g32000 Fragaria vesca
FvH4_7g32131 Fragaria vesca
Glyma.07G017700 Glycine max
Glyma.08G202900 Glycine max
Glyma.13G355800 Glycine max
Glyma.15G018300 Glycine max
Gohir.A02G119100 Gossypium hirsutum
Gohir.A05G128000 Gossypium hirsutum
Gohir.A06G188875 Gossypium hirsutum
Gohir.D03G024850 Gossypium hirsutum
Gohir.D03G059900 Gossypium hirsutum
Gohir.D03G080351 Gossypium hirsutum
Gohir.D05G132500 Gossypium hirsutum
Gohir.D06G197450 Gossypium hirsutum
Gorai.003G063800 Gossypium raimondii
Gorai.003G083400 Gossypium raimondii
Gorai.009G136200 Gossypium raimondii
Gorai.010G229800 Gossypium raimondii
GSVIVG01017039001 Vitis vinifera
HanXRQChr01g0017801 Helianthus annuus
HanXRQChr10g0310971 Helianthus annuus
HanXRQChr14g0434431 Helianthus annuus
Haze_16334 Corylus avellana
Hma1.2p1_0659F.1_g197350 Hydrangea macrophylla
Hma1.2p1_1689F.1_g297670 Hydrangea macrophylla
HPP92_008092 Vanilla planifolia
Hund00665 Selenicereus undatus
Hund06648 Selenicereus undatus
Lalb_Chr01g0013091 Lupinus albus
Lalb_Chr25g0280081 Lupinus albus
Lj3g0012728 Lotus japonicus
Lj4A820G41 Lonicera japonica
Lj4C820T9 Lonicera japonica
Lsat_1_v5_gn_2_39201 Lactuca sativa
Lsat_1_v5_gn_7_27180 Lactuca sativa
Manes.04G131700 Manihot esculenta
Manes.11G036200 Manihot esculenta
Mapoly0022s0096 Marchantia polymorpha
MBI01_g24453_MAGBIO Magnolia biondii
MBI01_g39826_MAGBIO Magnolia biondii
MBI03_g21265_MAGBIO Magnolia biondii
MBI07_g11499_MAGBIO Magnolia biondii
MCO13G545 Micromonas commoda
MD09G1207100 Malus domestica
MD17G1187800 Malus domestica
Medtr8g013720 Medicago truncatula
MELO3C012986.2 Cucumis melo
Migut.H00960 Erythranthe guttata
MSTRG.23509 Avicennia marina
Nitab4.5_0002549g0020 Nicotiana tabacum
Nitab4.5_0004354g0010 Nicotiana tabacum
Nn2g11632 Nelumbo nucifera
Nn3g18163 Nelumbo nucifera
Oeu017626.1 Olea europaea
Oeu050081.1 Olea europaea
Os01g0232400 Oryza sativa ssp. japonica
Peaxi162Scf00090g00073 Petunia axillaris
PGR102G1287 Punica granatum
PGR102G1422 Punica granatum
PGSC0003DMG400008535 Solanum tuberosum
Phvul.005G170500 Phaseolus vulgaris
Phvul.010G147000 Phaseolus vulgaris
Potri.001G187000 Populus trichocarpa
Pp3c13_8800 Physcomitrium patens
Pp3c1_18430 Physcomitrium patens
Pp3c2_17390 Physcomitrium patens
Pp3c2_19000 Physcomitrium patens
PRCOL_00002233 Prasinoderma coloniale
Prupe.3G063200 Prunus persica
Psat4g198440 Pisum sativum
PSO210G6330 Papaver somniferum
PSO210G6397 Papaver somniferum
QL04p048641 Quercus lobata
QL05p021104 Quercus lobata
RcHm_v2.0_Chr2g0139591 Rosa chinensis
RcHm_v2.0_Chr2g0139601 Rosa chinensis
Rhsim08G0225700 Rhododendron simsii
Sabra01G0153300 Salix brachista
SalBow1G1048 Salvia bowleyana
SalBow1G2060 Salvia bowleyana
SalBow1G5856 Salvia bowleyana
Sc12g0009570 Simmondsia chinensis
Sed0003559 Sechium edule
Sed0011470 Sechium edule
SEGI_12342 Sequoiadendron giganteum
SEGI_23305 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16540 Striga asiatica
SHI11063 Sapria himalayana
SMO340G0180 Selaginella moellendorffii
Solyc04g047770.3 Solanum lycopersicum
Sopen04g017970 Solanum pennellii
Sp3g14640 Schrenkiella parvula
TAR102G0002 Trochodendron aralioides
TAR383G0532 Trochodendron aralioides
TAR624G1104 Trochodendron aralioides
THA.LOC104810534 Tarenaya hassleriana
THA.LOC104817968 Tarenaya hassleriana
Thecc.06G096000 Theobroma cacao
Thhalv10020187m.g Eutrema salsugineum
TPR.G14825 Trifolium pratense
TWI12G0239 Tripterygium wilfordii
TWI18G0079 Tripterygium wilfordii
TWI75G1811 Tripterygium wilfordii
vmacro18870 Vaccinium macrocarpon
vmacro18871 Vaccinium macrocarpon
VMungo0331G0049 Vigna mungo
VMungo1080G0563 Vigna mungo
Zm00001eb119170 Zea mays
Zm00001eb339300 Zea mays

User provided reference genes

Program Settings