Gene: COL.COLO4_30474

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_30474
  • Transcript Identifier COL.rna29190
  • Gene Type Coding gene
  • Location AWUE01020733.1 : 36062-39617 : positive

Gene Family Information

  • ID HOM05D003995
  • #Genes/#Species 175/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna29190
  • GenBank OMO66624.1
  • id gene30446
  • gene_name COLO4_30474
  • uniprot A0A1R3H8F7

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035652
ISO
PLAZA Integrative Orthologyclathrin-coated vesicle cargo loading AT3G16270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043130
IEA
GOA Databaseubiquitin binding
GO:0043130
IEA
InterProubiquitin binding
GO:0035091
IEA
GOA Databasephosphatidylinositol binding
GO:0035091
IEA
InterProphosphatidylinositol binding
GO:0030276
ISO
PLAZA Integrative Orthologyclathrin binding AT3G16270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030136
IEA
GOA Databaseclathrin-coated vesicle
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT3G16270
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT3G16270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008942 ENTH/VHS
IPR013809 ENTH domain
IPR035802 Tepsin, ENTH/VHS domain
IPR039273 AP-4 complex accessory subunit Tepsin
IPR002014 VHS domain
Mapman id Description
22.3.1.8.3 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.CCV accessory factor activities.regulatory protein (MTV1)