Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23230 Brassica napus
A07p26790 Brassica napus
Aa31LG7G450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.72 Anthoceros agrestis
Actinidia18235 Actinidia chinensis
Actinidia25447 Actinidia chinensis
Actinidia28303 Actinidia chinensis
Actinidia28304 Actinidia chinensis
Ah.02g130190 Amaranthus hybridus
AL2G40760 Arabidopsis lyrata
Aqoxy7G03430 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.39XWEQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.448EM4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5U1YL2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A796BP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AIB04B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E1J0LN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UV7GDF Arachis hypogaea
AT1G80680 Arabidopsis thaliana
ATR0048G029 Amborella trichopoda
ATR0564G275 Amborella trichopoda
ATR0564G390 Amborella trichopoda
Atru.chr10.2393 Acer truncatum
Atru.chr10.2394 Acer truncatum
Atru.chr10.2395 Acer truncatum
Atru.chr10.2396 Acer truncatum
AUR62013548 Chenopodium quinoa
AUR62019191 Chenopodium quinoa
AUR62026733 Chenopodium quinoa
BcaB02g07257 Brassica carinata
BcaB05g25235 Brassica carinata
BcaC08g45332 Brassica carinata
BolC6t38107H Brassica oleracea
BraA02t07320Z Brassica rapa
BraA02t07321Z Brassica rapa
BraA07t30322Z Brassica rapa
C02p36990 Brassica napus
C06p29420 Brassica napus
CAN.G1363.9 Capsicum annuum
CAN.G407.47 Capsicum annuum
CANSAT56G3222 Cannabis sativa
CARHR072120 Cardamine hirsuta
CARHR072130 Cardamine hirsuta
CARHR073830 Cardamine hirsuta
CARHR073840 Cardamine hirsuta
Carub.0002s2688 Capsella rubella
Ca_06471_v3 Cicer arietinum L.
CBR_g34675 Chara braunii
Cc04_g04890 Coffea canephora
CDE05G2347 Ceratophyllum demersum
Cfa001895 Carpinus fangiana
Ciclev10024784m.g Citrus clementina
CiPaw.01G252800 Carya illinoinensis
ClCG02G022560 Citrullus lanatus
COL.COLO4_26660 Corchorus olitorius
Cpa.g.sc2.90 Carica papaya
Cpa.g.sc2.93 Carica papaya
Cre02.g086887 Chlamydomonas reinhardtii
CSS0032385 Camellia sinensis var. sinensis
DCAR_025582 Daucus carota
Dinv09709 Davidia involucrata
Dinv12731 Davidia involucrata
Dinv21395 Davidia involucrata
Duzib235G0729 Durio zibethinus
ECA247G0583 Erigeron canadensis
EL10Ac3g05211 Beta vulgaris
Eucgr.F03948 Eucalyptus grandis
FAN02G0445 Fragaria x ananassa
FAN08G1096 Fragaria x ananassa
FAN08G1181 Fragaria x ananassa
FAN12G2419 Fragaria x ananassa
FAN13G1654 Fragaria x ananassa
FAN15G1664 Fragaria x ananassa
FAN18G0022 Fragaria x ananassa
FAN25G0399 Fragaria x ananassa
FAN27G3525 Fragaria x ananassa
FvH4_5g27200 Fragaria vesca
Glyma.14G005800 Glycine max
Gohir.A10G069101 Gossypium hirsutum
Gohir.D10G082300 Gossypium hirsutum
Gorai.011G089200 Gossypium raimondii
GSVIVG01017553001 Vitis vinifera
HanXRQChr02g0034921 Helianthus annuus
HanXRQChr02g0034941 Helianthus annuus
HanXRQChr02g0034961 Helianthus annuus
HanXRQChr03g0080251 Helianthus annuus
HanXRQChr03g0080271 Helianthus annuus
HanXRQChr08g0217431 Helianthus annuus
Haze_16646 Corylus avellana
HPP92_024664 Vanilla planifolia
HPP92_024665 Vanilla planifolia
HPP92_024673 Vanilla planifolia
Lalb_Chr04g0247201 Lupinus albus
Lj5A78T80 Lonicera japonica
LjContig00081g0020682 Lotus japonicus
Lsat_1_v5_gn_1_32000 Lactuca sativa
Manes.04G104700 Manihot esculenta
Mapoly0028s0046 Marchantia polymorpha
MBI05_g01294_MAGBIO Magnolia biondii
MCO02G284 Micromonas commoda
MD08G1215300 Malus domestica
MD15G1399200 Malus domestica
MD16G1257100 Malus domestica
Medtr5g097890 Medicago truncatula
MELO3C014532.2 Cucumis melo
Migut.I00709 Erythranthe guttata
Nitab4.5_0001454g0080 Nicotiana tabacum
Nitab4.5_0011117g0010 Nicotiana tabacum
Nn1g04287 Nelumbo nucifera
Nn1g04288 Nelumbo nucifera
Nn5g28958 Nelumbo nucifera
Oeu008404.1 Olea europaea
Oeu008405.4 Olea europaea
Oeu010367.1 Olea europaea
Oeu033932.1 Olea europaea
Os03g0172000 Oryza sativa ssp. japonica
Peaxi162Scf00332g00329 Petunia axillaris
PGR102G3368 Punica granatum
PGSC0003DMG400014195 Solanum tuberosum
Phvul.008G287100 Phaseolus vulgaris
Potri.003G180100 Populus trichocarpa
Pp3c26_7670 Physcomitrium patens
Pp3c26_7720 Physcomitrium patens
PRCOL_00003883 Prasinoderma coloniale
Prupe.2G099100 Prunus persica
Psat2g003960 Pisum sativum
PSO210G6726 Papaver somniferum
PSO447G0077 Papaver somniferum
QL05p034889 Quercus lobata
RcHm_v2.0_Chr1g0336931 Rosa chinensis
Rhsim08G0208100 Rhododendron simsii
Sabra15G0011000 Salix brachista
SalBow5G0986 Salvia bowleyana
SalBow5G1255 Salvia bowleyana
SalBow5G3025 Salvia bowleyana
SalBow5G5111 Salvia bowleyana
SalBow5G5560 Salvia bowleyana
SalBow6G4790 Salvia bowleyana
SalBow7G0967 Salvia bowleyana
SalBow7G2866 Salvia bowleyana
Sc26g0002670 Simmondsia chinensis
Sed0002099 Sechium edule
SEGI_18885 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02755 Striga asiatica
SHI11253 Sapria himalayana
SMO367G0807 Selaginella moellendorffii
Solyc03g117120.4 Solanum lycopersicum
Sopen03g036030 Solanum pennellii
Sp5g35080 Schrenkiella parvula
TAR381G0103 Trochodendron aralioides
TAR381G0623 Trochodendron aralioides
TAR625G0765 Trochodendron aralioides
THA.LOC104812443 Tarenaya hassleriana
Thecc.06G038600 Theobroma cacao
Thhalv10018057m.g Eutrema salsugineum
TPR.G15053 Trifolium pratense
TWI12G1414 Tripterygium wilfordii
unitig_0.g1109 Utricularia gibba
unitig_61.g26229 Utricularia gibba
unitig_61.g26230 Utricularia gibba
vmacro19039 Vaccinium macrocarpon
VMungo0384G0001 Vigna mungo
VMungo0647G1679 Vigna mungo
Zm00001eb037140 Zea mays
Zm00001eb052930 Zea mays
Zm00001eb059520 Zea mays
Zm00001eb072150 Zea mays
Zm00001eb075600 Zea mays
Zm00001eb104230 Zea mays
Zm00001eb154890 Zea mays
Zm00001eb206280 Zea mays
Zm00001eb236280 Zea mays
Zm00001eb242170 Zea mays
Zm00001eb336550 Zea mays
Zm00001eb386790 Zea mays
Zm00001eb386800 Zea mays
Zm00001eb402160 Zea mays
Zm00001eb421450 Zea mays

User provided reference genes

Program Settings