Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p28510 Brassica napus
A03p28530 Brassica napus
A05p23780 Brassica napus
A09p31780 Brassica napus
Aa31LG6G8750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4865 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.175 Anthoceros agrestis
Actinidia23018 Actinidia chinensis
Ah.05g178390 Amaranthus hybridus
AL1G50340 Arabidopsis lyrata
AL6G42970 Arabidopsis lyrata
Aqoxy5G02955 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AC170Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NDRV14 Arachis hypogaea
AT1G35470 Arabidopsis thaliana
AT4G09200 Arabidopsis thaliana
AT4G09250 Arabidopsis thaliana
AT4G09310 Arabidopsis thaliana
AT4G09340 Arabidopsis thaliana
ATR1136G046 Amborella trichopoda
Atru.chr2.1825 Acer truncatum
AUR62004621 Chenopodium quinoa
AUR62023516 Chenopodium quinoa
BcaB01g02792 Brassica carinata
BcaB01g02795 Brassica carinata
BcaB03g13663 Brassica carinata
BcaB07g33091 Brassica carinata
BcaC01g04722 Brassica carinata
BcaC01g04724 Brassica carinata
BcaC05g27736 Brassica carinata
BcaC08g43739 Brassica carinata
BolC3t15755H Brassica oleracea
BolC3t15761H Brassica oleracea
BolC5t32471H Brassica oleracea
BolC6t36252H Brassica oleracea
BraA03t12055Z Brassica rapa
BraA05t21248Z Brassica rapa
BraA09t38715Z Brassica rapa
C03p34460 Brassica napus
C03p34480 Brassica napus
C03p34490 Brassica napus
C05p37240 Brassica napus
C06p11170 Brassica napus
CAN.G354.51 Capsicum annuum
CAN.G354.54 Capsicum annuum
CARHR034230 Cardamine hirsuta
CARHR034240 Cardamine hirsuta
CARHR260350 Cardamine hirsuta
Carub.0001s3308 Capsella rubella
Carub.0006s2784 Capsella rubella
Ca_19699_v3 Cicer arietinum L.
Cc10_g10260 Coffea canephora
CDE02G3748 Ceratophyllum demersum
CDE08G1205 Ceratophyllum demersum
Cfa012929 Carpinus fangiana
Cfa012932 Carpinus fangiana
Cfa023097 Carpinus fangiana
Cfa023121 Carpinus fangiana
Ciclev10001078m.g Citrus clementina
CiPaw.08G001800 Carya illinoinensis
ClCG08G000300 Citrullus lanatus
COL.COLO4_24795 Corchorus olitorius
Cpa.g.c30412.1 Carica papaya
Cpa.g.c39095 Carica papaya
Cre01.g007150 Chlamydomonas reinhardtii
Cre09.g387801 Chlamydomonas reinhardtii
CsaV3_5G040450 Cucumis sativus L.
CSS0005180 Camellia sinensis var. sinensis
CSS0022245 Camellia sinensis var. sinensis
CSS0049725 Camellia sinensis var. sinensis
DCAR_001451 Daucus carota
DCAR_028620 Daucus carota
DCAR_028622 Daucus carota
DCAR_028625 Daucus carota
Dinv04083 Davidia involucrata
Dinv41741 Davidia involucrata
Duzib116G0916 Durio zibethinus
Duzib177G0129 Durio zibethinus
ECA247G1339 Erigeron canadensis
EL10Ac1g00112 Beta vulgaris
Eucgr.F02579 Eucalyptus grandis
FAN04G2445 Fragaria x ananassa
FAN13G2487 Fragaria x ananassa
FAN18G2269 Fragaria x ananassa
FvH4_5g32270 Fragaria vesca
Glyma.08G238500 Glycine max
Glyma.12G000900 Glycine max
Gohir.A05G251300 Gossypium hirsutum
Gohir.A09G115500 Gossypium hirsutum
Gohir.A13G059533 Gossypium hirsutum
Gohir.D05G252500 Gossypium hirsutum
Gohir.D09G112300 Gossypium hirsutum
Gohir.D10G179233 Gossypium hirsutum
Gohir.D13G134850 Gossypium hirsutum
Gorai.006G003400 Gossypium raimondii
Gorai.006G130100 Gossypium raimondii
Gorai.009G264700 Gossypium raimondii
Gorai.009G423600 Gossypium raimondii
GSVIVG01001786001 Vitis vinifera
HanXRQChr04g0109631 Helianthus annuus
Haze_21286 Corylus avellana
Hma1.2p1_0342F.1_g130710 Hydrangea macrophylla
HPP92_001193 Vanilla planifolia
Hund16785 Selenicereus undatus
Lalb_Chr01g0000071 Lupinus albus
Lj3g0000257 Lotus japonicus
Lj4C483G1 Lonicera japonica
Lsat_1_v5_gn_1_12460 Lactuca sativa
Manes.02G196200 Manihot esculenta
Manes.18G104100 Manihot esculenta
Mapoly0002s0237 Marchantia polymorpha
MBI06_g32171_MAGBIO Magnolia biondii
MCO01G564 Micromonas commoda
MD08G1220100 Malus domestica
MD15G1410300 Malus domestica
Medtr4g032800 Medicago truncatula
MELO3C022219.2 Cucumis melo
Migut.C00143 Erythranthe guttata
Migut.C01295 Erythranthe guttata
MSTRG.1555 Avicennia marina
Nitab4.5_0000130g0080 Nicotiana tabacum
Nitab4.5_0009321g0030 Nicotiana tabacum
Nn3g18941 Nelumbo nucifera
Nn5g27566 Nelumbo nucifera
Oeu051791.1 Olea europaea
Oeu064077.1 Olea europaea
Os02g0556600 Oryza sativa ssp. japonica
Peaxi162Scf00076g00225 Petunia axillaris
PGR042G0234 Punica granatum
PGSC0003DMG400022553 Solanum tuberosum
Phvul.011G000900 Phaseolus vulgaris
Potri.013G108400 Populus trichocarpa
Potri.019G080800 Populus trichocarpa
Pp3c16_23970 Physcomitrium patens
Pp3c19_1530 Physcomitrium patens
Pp3c22_200 Physcomitrium patens
Pp3c25_15350 Physcomitrium patens
PRCOL_00002342 Prasinoderma coloniale
Prupe.1G552200 Prunus persica
Psat7g226120 Pisum sativum
PSO017G0948 Papaver somniferum
PSO170G2127 Papaver somniferum
QL02p025746 Quercus lobata
RcHm_v2.0_Chr7g0228461 Rosa chinensis
RcHm_v2.0_Chr7g0228471 Rosa chinensis
Rhsim06G0114100 Rhododendron simsii
Sabra13G0093600 Salix brachista
Sabra19G0091700 Salix brachista
SabraUnG0004400 Salix brachista
SalBow7G1596 Salvia bowleyana
Sc23g0001390 Simmondsia chinensis
Sed0011736 Sechium edule
Sed0013629 Sechium edule
SEGI_19081 Sequoiadendron giganteum
SEGI_20889 Sequoiadendron giganteum
SEGI_28086 Sequoiadendron giganteum
SEGI_33732 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32530 Striga asiatica
SGA_v2.0_scaffold24G10576 Striga asiatica
SHI26286 Sapria himalayana
SMO236G0134 Selaginella moellendorffii
Solyc03g033380.3 Solanum lycopersicum
Sopen03g006150 Solanum pennellii
Sp1g30230 Schrenkiella parvula
Sp6g08200 Schrenkiella parvula
TAR628G0992 Trochodendron aralioides
THA.LOC104816477 Tarenaya hassleriana
Thecc.08G187400 Theobroma cacao
Thecc.08G187700 Theobroma cacao
Thhalv10001818m.g Eutrema salsugineum
TPR.G34173 Trifolium pratense
TWI59G1118 Tripterygium wilfordii
unitig_749.g13881 Utricularia gibba
vmacro12470 Vaccinium macrocarpon
vmacro12471 Vaccinium macrocarpon
VMungo1127G1719 Vigna mungo
Zm00001eb182000 Zea mays
Zm00001eb243840 Zea mays

User provided reference genes

Program Settings