Gene: AT4G09200
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G09200
- Transcript Identifier AT4G09200.1
- Gene Type Coding gene
- Location Chr4 : 5859380-5861671 : positive
Gene Family Information
- ID HOM05D003906
- #Genes/#Species 178/98
- Phylogenetic origin
- ID ORTHO05D004776
- #Genes/#Species 171/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G09200.1
- uniprot Q8RX25
Descriptions
- Description SPla/RYanodine receptor (SPRY) domain-containing protein
- Computational description SPla/RYanodine receptor (SPRY) domain-containing protein; CONTAINS InterPro DOMAIN/s: B302 (SPRY)-like (InterPro:IPR001870), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144), SPla/RYanodine receptor SPRY (InterPro:IPR003877); BEST Arabidopsis thaliana protein match is: SPla/RYanodine receptor (SPRY) domain-containing protein (TAIR:AT4G09310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007010 | IBA | Gene Ontology | cytoskeleton organization | 1 |
| GO:0007166 | IBA | Gene Ontology | cell surface receptor signaling pathway | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005737 | IBA | Gene Ontology | cytoplasm | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003877 | SPRY domain |
| IPR043136 | B30.2/SPRY domain superfamily |
| IPR006595 | CTLH, C-terminal LisH motif |
| IPR044736 | Ran-binding protein Vid30/RanBPM/SPLA, SPRY domain |
| IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| IPR013144 | CRA domain |
| IPR024964 | CTLH/CRA C-terminal to LisH motif domain |
| Mapman id | Description |
|---|---|
| 19.2.1.3.1.1 | Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component RanBPM/GID1 |