Gene: AT4G09310
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G09310
- Transcript Identifier AT4G09310.1
- Gene Type Coding gene
- Location Chr4 : 5902949-5905240 : positive
Gene Family Information
- ID HOM05D003906
- #Genes/#Species 178/98
- Phylogenetic origin
- ID ORTHO05D004776
- #Genes/#Species 171/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G09310.1
Descriptions
- Description SPla/RYanodine receptor (SPRY) domain-containing protein
- Computational description SPla/RYanodine receptor (SPRY) domain-containing protein; CONTAINS InterPro DOMAIN/s: B302 (SPRY)-like (InterPro:IPR001870), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144), SPla/RYanodine receptor SPRY (InterPro:IPR003877); BEST Arabidopsis thaliana protein match is: SPla/RYanodine receptor (SPRY) domain-containing protein (TAIR:AT4G09200.1); Has 841 Blast hits to 827 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 362; Fungi - 175; Plants - 154; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003877 | SPRY domain |
| IPR043136 | B30.2/SPRY domain superfamily |
| IPR006595 | CTLH, C-terminal LisH motif |
| IPR044736 | Ran-binding protein Vid30/RanBPM/SPLA, SPRY domain |
| IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| IPR013144 | CRA domain |
| IPR024964 | CTLH/CRA C-terminal to LisH motif domain |
| Mapman id | Description |
|---|---|
| 19.2.1.3.1.1 | Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component RanBPM/GID1 |