Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05650 Brassica napus
A03p63890 Brassica napus
A08p18050 Brassica napus
Aa31LG2G16920 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2429 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2432 Anthoceros agrestis
Actinidia13307 Actinidia chinensis
Actinidia24572 Actinidia chinensis
Ah.10g035410 Amaranthus hybridus
AL7G19040 Arabidopsis lyrata
Aqoxy520s001 Aquilegia oxysepala
Aqoxy7G01675 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D2VLN9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NKLE2F Arachis hypogaea
AT4G32700 Arabidopsis thaliana
ATR0484G001 Amborella trichopoda
ATR0916G001 Amborella trichopoda
ATR0916G007 Amborella trichopoda
Atru.chr7.2176 Acer truncatum
Atru.chr7.2294 Acer truncatum
Atru.chr7.2295 Acer truncatum
AUR62009357 Chenopodium quinoa
AUR62023039 Chenopodium quinoa
BcaB02g06822 Brassica carinata
BcaB03g12757 Brassica carinata
BcaC09g52063 Brassica carinata
BolC3t21018H Brassica oleracea
BraA01t00535Z Brassica rapa
BraA03t15458Z Brassica rapa
BraA08t33755Z Brassica rapa
C01p06220 Brassica napus
C03p87160 Brassica napus
CAN.G886.4 Capsicum annuum
CARHR240680 Cardamine hirsuta
Carub.0007s0783 Capsella rubella
Ca_12818_v3 Cicer arietinum L.
CBR_g1000 Chara braunii
CBR_g998 Chara braunii
Cc08_g08480 Coffea canephora
CDE05G0389 Ceratophyllum demersum
CDE05G0843 Ceratophyllum demersum
CDE05G0997 Ceratophyllum demersum
Cfa005759 Carpinus fangiana
Ciclev10007228m.g Citrus clementina
CiPaw.07G208100 Carya illinoinensis
ClCG08G012400 Citrullus lanatus
COL.COLO4_18706 Corchorus olitorius
Cpa.g.c41986 Carica papaya
Cpa.g.sc205.2 Carica papaya
Cpa.g.sc78.91 Carica papaya
Cpa.g.sc78.92 Carica papaya
Cpa.g.sc78.93 Carica papaya
Cre06.g257800 Chlamydomonas reinhardtii
Cre08.g384390 Chlamydomonas reinhardtii
Cre16.g664301 Chlamydomonas reinhardtii
Cre17.g736150 Chlamydomonas reinhardtii
CsaV3_2G031090 Cucumis sativus L.
CSS0006872 Camellia sinensis var. sinensis
CSS0033742 Camellia sinensis var. sinensis
CSS0036613 Camellia sinensis var. sinensis
CSS0042394 Camellia sinensis var. sinensis
CSS0044117 Camellia sinensis var. sinensis
CSS0046196 Camellia sinensis var. sinensis
DCAR_000737 Daucus carota
Dinv30246 Davidia involucrata
Duzib150G0348 Durio zibethinus
ECA233G2562 Erigeron canadensis
EL10Ac2g04091 Beta vulgaris
EL10Ac3g06398 Beta vulgaris
EL10Ac9g22330 Beta vulgaris
Eucgr.C02886 Eucalyptus grandis
FAN15G2018 Fragaria x ananassa
FAN20G0810 Fragaria x ananassa
FAN27G2633 Fragaria x ananassa
FvH4_2g36240 Fragaria vesca
Glyma.14G140800 Glycine max
Gohir.A13G185900 Gossypium hirsutum
Gohir.D13G192600 Gossypium hirsutum
Gorai.013G218600 Gossypium raimondii
GSVIVG01035684001 Vitis vinifera
HanXRQChr14g0435171 Helianthus annuus
Haze_12557 Corylus avellana
Haze_13402 Corylus avellana
Haze_21830 Corylus avellana
HPP92_002908 Vanilla planifolia
HPP92_002909 Vanilla planifolia
Hund03446 Selenicereus undatus
Lalb_Chr24g0402621 Lupinus albus
Lalb_Chr24g0402631 Lupinus albus
Lj1g0022555 Lotus japonicus
Lj7C708G10 Lonicera japonica
Lsat_1_v5_gn_3_5760 Lactuca sativa
Lsat_1_v5_gn_4_168341 Lactuca sativa
Lsat_1_v5_gn_4_66900 Lactuca sativa
Lsat_1_v5_gn_5_11300 Lactuca sativa
Lsat_1_v5_gn_6_11181 Lactuca sativa
Lsat_1_v5_gn_6_18580 Lactuca sativa
Lsat_1_v5_gn_6_24580 Lactuca sativa
Lsat_1_v5_gn_6_75601 Lactuca sativa
Lsat_1_v5_gn_7_62921 Lactuca sativa
Lsat_1_v5_gn_8_47340 Lactuca sativa
Lsat_1_v5_gn_9_62720 Lactuca sativa
Manes.03G066340 Manihot esculenta
Mapoly0097s0045 Marchantia polymorpha
MBI04_g19381_MAGBIO Magnolia biondii
MCO01G257 Micromonas commoda
MCO12G059 Micromonas commoda
MD08G1120000 Malus domestica
MD15G1099000 Malus domestica
MD15G1099100 Malus domestica
MD15G1099200 Malus domestica
Medtr0312s0040 Medicago truncatula
Medtr1g007510 Medicago truncatula
Medtr1g008600 Medicago truncatula
MELO3C011159.2 Cucumis melo
Migut.A00236 Erythranthe guttata
Nitab4.5_0000250g0220 Nicotiana tabacum
Nitab4.5_0008974g0010 Nicotiana tabacum
Nn7g37445 Nelumbo nucifera
Nn8g39185 Nelumbo nucifera
Oeu018088.1 Olea europaea
Oeu031571.1 Olea europaea
Os12g0291000 Oryza sativa ssp. japonica
Peaxi162Scf00105g00415 Petunia axillaris
Peaxi162Scf00105g00416 Petunia axillaris
PGR044G0516 Punica granatum
PGSC0003DMG400014493 Solanum tuberosum
PGSC0003DMG400014494 Solanum tuberosum
Phvul.008G158500 Phaseolus vulgaris
Potri.018G036600 Populus trichocarpa
Pp3c1_24760 Physcomitrium patens
Pp3c20_23350 Physcomitrium patens
Pp3c5_12930 Physcomitrium patens
PRCOL_00006968 Prasinoderma coloniale
Prupe.1G453900 Prunus persica
Psat5g138760 Pisum sativum
Psat6g033880 Pisum sativum
PSO198G0085 Papaver somniferum
PSO782G2669 Papaver somniferum
QL12p026194 Quercus lobata
RcHm_v2.0_Chr6g0305641 Rosa chinensis
Rhsim01G0104700 Rhododendron simsii
Rhsim01G0104800 Rhododendron simsii
Rhsim01G0105200 Rhododendron simsii
Rhsim01G0105300 Rhododendron simsii
Rhsim01G0105400 Rhododendron simsii
Rhsim01G0106100 Rhododendron simsii
Rhsim02G0183600 Rhododendron simsii
RhsimUnG0237900 Rhododendron simsii
SalBow4G0524 Salvia bowleyana
Sc23g0005860 Simmondsia chinensis
Sed0021057 Sechium edule
SEGI_02430 Sequoiadendron giganteum
SEGI_15374 Sequoiadendron giganteum
SEGI_21359 Sequoiadendron giganteum
SEGI_30069 Sequoiadendron giganteum
SGA_v2.0_scaffold243G44298 Striga asiatica
SHI18629 Sapria himalayana
SHI18630 Sapria himalayana
SHI18631 Sapria himalayana
SHI18632 Sapria himalayana
SHI18636 Sapria himalayana
SHI18637 Sapria himalayana
Solyc08g068110.1 Solanum lycopersicum
Solyc08g068120.3 Solanum lycopersicum
Sopen08g021990 Solanum pennellii
Sp7g30460 Schrenkiella parvula
TAR636G2332 Trochodendron aralioides
TAR636G2480 Trochodendron aralioides
THA.LOC104818599 Tarenaya hassleriana
Thecc.09G038600 Theobroma cacao
Thhalv10024191m.g Eutrema salsugineum
TPR.G12075 Trifolium pratense
TWI34G0995 Tripterygium wilfordii
unitig_37.g12219 Utricularia gibba
VMungo0647G0349 Vigna mungo
VMungo0647G1088 Vigna mungo
VMungo0647G1905 Vigna mungo
Zm00001eb409880 Zea mays

User provided reference genes

Program Settings