Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p07510 Brassica napus
A03p61070 Brassica napus
A10p23060 Brassica napus
Aa31LG11G13610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_199.43 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2791 Anthoceros agrestis
Actinidia18960 Actinidia chinensis
Actinidia35063 Actinidia chinensis
Ah.03g138770 Amaranthus hybridus
AL2G32240 Arabidopsis lyrata
Aqoxy1G02793 Aquilegia oxysepala
Aqoxy6G02137 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.03AHKF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WM1R7K Arachis hypogaea
AT1G72550 Arabidopsis thaliana
ATR0789G018 Amborella trichopoda
Atru.chr10.875 Acer truncatum
Atru.chr11.247 Acer truncatum
AUR62008644 Chenopodium quinoa
AUR62014243 Chenopodium quinoa
BcaB08g36877 Brassica carinata
BcaC03g18463 Brassica carinata
BcaC04g18917 Brassica carinata
BolC1t02481H Brassica oleracea
BolC2t06732H Brassica oleracea
BolC5t30108H Brassica oleracea
BolC9t58950H Brassica oleracea
BraA10t44375Z Brassica rapa
C02p08100 Brassica napus
C03p08720 Brassica napus
C09p61050 Brassica napus
CAN.G282.43 Capsicum annuum
CANSAT80G2907 Cannabis sativa
CARHR065490 Cardamine hirsuta
CARHR202060 Cardamine hirsuta
Carub.0002s1941 Capsella rubella
Ca_21737_v3 Cicer arietinum L.
CBR_g49053 Chara braunii
Cc00_g04570 Coffea canephora
CDE10G0520 Ceratophyllum demersum
CDE10G0816 Ceratophyllum demersum
Cfa021591 Carpinus fangiana
Cfa026018 Carpinus fangiana
Ciclev10014690m.g Citrus clementina
CiPaw.04G139300 Carya illinoinensis
CiPaw.15G121900 Carya illinoinensis
CiPaw.16G081500 Carya illinoinensis
ClCG06G015260 Citrullus lanatus
COL.COLO4_28877 Corchorus olitorius
COL.COLO4_30269 Corchorus olitorius
Cpa.g.sc271.5 Carica papaya
Cre13.g603900 Chlamydomonas reinhardtii
CsaV3_1G003150 Cucumis sativus L.
CSS0022273 Camellia sinensis var. sinensis
DCAR_011621 Daucus carota
Dinv38617 Davidia involucrata
Duzib084G0834 Durio zibethinus
Duzib205G0197 Durio zibethinus
ECA240G3266 Erigeron canadensis
EL10Ac6g14132 Beta vulgaris
Eucgr.B00970 Eucalyptus grandis
Eucgr.B02012 Eucalyptus grandis
Eucgr.E02529 Eucalyptus grandis
FAN08G2534 Fragaria x ananassa
FAN13G0156 Fragaria x ananassa
FAN18G1085 Fragaria x ananassa
FvH4_5g13020 Fragaria vesca
Glyma.05G016400 Glycine max
Glyma.05G172902 Glycine max
Glyma.10G113400 Glycine max
Glyma.17G083700 Glycine max
Gohir.A12G270300 Gossypium hirsutum
Gohir.D12G270700 Gossypium hirsutum
Gorai.008G291100 Gossypium raimondii
GSVIVG01008188001 Vitis vinifera
HanXRQChr03g0078721 Helianthus annuus
HanXRQChr05g0129701 Helianthus annuus
HanXRQChr09g0270121 Helianthus annuus
Haze_18553 Corylus avellana
Haze_18554 Corylus avellana
Haze_25313 Corylus avellana
Haze_25314 Corylus avellana
Haze_25315 Corylus avellana
Haze_26625 Corylus avellana
Hma1.2p1_0340F.1_g130210 Hydrangea macrophylla
Hma1.2p1_0340F.1_g130220 Hydrangea macrophylla
Hma1.2p1_0744F.1_g211650 Hydrangea macrophylla
HPP92_012745 Vanilla planifolia
HPP92_013143 Vanilla planifolia
HPP92_013144 Vanilla planifolia
HPP92_013145 Vanilla planifolia
HPP92_013146 Vanilla planifolia
HPP92_013183 Vanilla planifolia
HPP92_013186 Vanilla planifolia
Hund27361 Selenicereus undatus
Lalb_Chr12g0197451 Lupinus albus
Lj4C813G7 Lonicera japonica
Lj4g0017423 Lotus japonicus
Lsat_1_v5_gn_1_100681 Lactuca sativa
Lsat_1_v5_gn_1_11920 Lactuca sativa
Lsat_1_v5_gn_4_30320 Lactuca sativa
Manes.06G055300 Manihot esculenta
Mapoly0013s0023 Marchantia polymorpha
MCO09G827 Micromonas commoda
MD06G1208000 Malus domestica
MD14G1218400 Malus domestica
Medtr4g112680 Medicago truncatula
Medtr5g077610 Medicago truncatula
MELO3C000039.2 Cucumis melo
MELO3C017266.2 Cucumis melo
MELO3C029751.2 Cucumis melo
Migut.L00154 Erythranthe guttata
Migut.L00155 Erythranthe guttata
Migut.M00517 Erythranthe guttata
Migut.N03353 Erythranthe guttata
Migut.O00831 Erythranthe guttata
MSTRG.22458 Avicennia marina
Nitab4.5_0000069g0100 Nicotiana tabacum
Nitab4.5_0000138g0100 Nicotiana tabacum
Nitab4.5_0000138g0110 Nicotiana tabacum
Nitab4.5_0001328g0030 Nicotiana tabacum
Nitab4.5_0006274g0010 Nicotiana tabacum
Nitab4.5_0021995g0010 Nicotiana tabacum
Nitab4.5_0023629g0010 Nicotiana tabacum
Nitab4.5_0023875g0010 Nicotiana tabacum
Nn3g17616 Nelumbo nucifera
Nn6g34733 Nelumbo nucifera
Oeu029991.1 Olea europaea
Oeu037756.2 Olea europaea
Os05g0558900 Oryza sativa ssp. japonica
Peaxi162Scf00153g00217 Petunia axillaris
PGR119G2172 Punica granatum
Phvul.003G180700 Phaseolus vulgaris
Potri.013G068100 Populus trichocarpa
Potri.018G070200 Populus trichocarpa
Pp3c19_13120 Physcomitrium patens
Pp3c22_15340 Physcomitrium patens
PRCOL_00001438 Prasinoderma coloniale
Prupe.5G041000 Prunus persica
Prupe.5G212200 Prunus persica
Psat4g043920 Pisum sativum
PSO339G3234 Papaver somniferum
PSO384G2719 Papaver somniferum
PSO676G0009 Papaver somniferum
QL10p021913 Quercus lobata
QL10p029183 Quercus lobata
RcHm_v2.0_Chr7g0184111 Rosa chinensis
Rhsim01G0138800 Rhododendron simsii
Rhsim09G0091000 Rhododendron simsii
Sabra13G0059400 Salix brachista
SalBow6G2606 Salvia bowleyana
Sc12g0007010 Simmondsia chinensis
Sed0025371 Sechium edule
SEGI_10599 Sequoiadendron giganteum
SEGI_15169 Sequoiadendron giganteum
SEGI_23908 Sequoiadendron giganteum
SEGI_27435 Sequoiadendron giganteum
SEGI_31614 Sequoiadendron giganteum
SEGI_36904 Sequoiadendron giganteum
SEGI_39885 Sequoiadendron giganteum
SGA_v2.0_scaffold116G32207 Striga asiatica
SGA_v2.0_scaffold127G34045 Striga asiatica
SMO351G0192 Selaginella moellendorffii
Solyc01g008310.4 Solanum lycopersicum
Sopen01g003830 Solanum pennellii
Sp5g27630 Schrenkiella parvula
Sp6g28120 Schrenkiella parvula
TAR374G1547 Trochodendron aralioides
TAR622G1091 Trochodendron aralioides
THA.LOC104806554 Tarenaya hassleriana
THA.LOC104820955 Tarenaya hassleriana
Thecc.03G060100 Theobroma cacao
Thhalv10007156m.g Eutrema salsugineum
TPR.G23867 Trifolium pratense
TPR.G25992 Trifolium pratense
TWI73G0611 Tripterygium wilfordii
unitig_0.g846 Utricularia gibba
unitig_60.g25860 Utricularia gibba
vmacro21052 Vaccinium macrocarpon
VMungo1215G2863 Vigna mungo
Zm00001eb267900 Zea mays

User provided reference genes

Program Settings