Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p29850 Brassica napus
A03p68920 Brassica napus
Aa31LG2G9550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis
Actinidia01898 Actinidia chinensis
Actinidia05611 Actinidia chinensis
Ah.04g152550 Amaranthus hybridus
Ah.09g235750 Amaranthus hybridus
AL2G15400 Arabidopsis lyrata
Aqoxy1G03805 Aquilegia oxysepala
Aqoxy3G03213 Aquilegia oxysepala
Aqoxy3G03214 Aquilegia oxysepala
Aqoxy3G03215 Aquilegia oxysepala
Aqoxy3G03252 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.58ANB0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8T1JJH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea
AT1G61040 Arabidopsis thaliana
ATR0589G045 Amborella trichopoda
ATR0763G146 Amborella trichopoda
Atru.chr7.2377 Acer truncatum
AUR62014784 Chenopodium quinoa
AUR62016972 Chenopodium quinoa
AUR62020979 Chenopodium quinoa
AUR62043193 Chenopodium quinoa
BcaB04g20309 Brassica carinata
BcaC02g10594 Brassica carinata
BcaC06g31829 Brassica carinata
BcaC09g49339 Brassica carinata
BolC1t03734H Brassica oleracea
BraA01t03113Z Brassica rapa
BraSC39t46172Z Brassica rapa
C01p37700 Brassica napus
C04p25600 Brassica napus
CAN.G1627.16 Capsicum annuum
CANSAT35G0257 Cannabis sativa
CANSAT54G1490 Cannabis sativa
CARHR052180 Cardamine hirsuta
Carub.0002s0416 Capsella rubella
Ca_08759_v3 Cicer arietinum L.
Ca_20186_v3 Cicer arietinum L.
Ca_25733_v3 Cicer arietinum L.
Ca_30219_v3 Cicer arietinum L.
CBR_g30024 Chara braunii
Cc02_g12930 Coffea canephora
CDE02G2043 Ceratophyllum demersum
Cfa025708 Carpinus fangiana
Ciclev10028000m.g Citrus clementina
CiPaw.10G046600 Carya illinoinensis
COL.COLO4_31510 Corchorus olitorius
Cpa.g.sc27.76 Carica papaya
Cre03.g196450 Chlamydomonas reinhardtii
CsaV3_4G005020 Cucumis sativus L.
CSS0027200 Camellia sinensis var. sinensis
CSS0028072 Camellia sinensis var. sinensis
DCAR_004097 Daucus carota
DCAR_004099 Daucus carota
DCAR_008049 Daucus carota
Dinv07531 Davidia involucrata
Duzib160G0164 Durio zibethinus
Duzib235G1026 Durio zibethinus
ECA240G0220 Erigeron canadensis
ECA248G2279 Erigeron canadensis
EL10Ac4g08952 Beta vulgaris
EL10Ac5g12107 Beta vulgaris
EL10Ac8g18529 Beta vulgaris
EL10Ac8g20336 Beta vulgaris
Eucgr.E03353 Eucalyptus grandis
FAN02G2028 Fragaria x ananassa
FAN03G0627 Fragaria x ananassa
FAN05G4405 Fragaria x ananassa
FAN09G3903 Fragaria x ananassa
FAN14G1138 Fragaria x ananassa
FAN14G3620 Fragaria x ananassa
FAN16G2290 Fragaria x ananassa
FAN21G0113 Fragaria x ananassa
FAN25G1603 Fragaria x ananassa
FvH4_3g04783 Fragaria vesca
FvH4_6g03621 Fragaria vesca
FvH4_6g03622 Fragaria vesca
FvH4_6g07870 Fragaria vesca
Glyma.03G168800 Glycine max
Glyma.03G230500 Glycine max
Glyma.07G194200 Glycine max
Glyma.13G060000 Glycine max
Glyma.13G182500 Glycine max
Glyma.19G170200 Glycine max
Gohir.A10G023800 Gossypium hirsutum
Gohir.D10G024500 Gossypium hirsutum
Gorai.011G025800 Gossypium raimondii
GSVIVG01006453001 Vitis vinifera
HanXRQChr10g0285841 Helianthus annuus
Haze_06507 Corylus avellana
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla
HPP92_024423 Vanilla planifolia
Lalb_Chr04g0260391 Lupinus albus
Lalb_Chr05g0218341 Lupinus albus
Lalb_Chr16g0383591 Lupinus albus
Lalb_Chr20g0113451 Lupinus albus
Lj1g0019037 Lotus japonicus
Lj1g0026238 Lotus japonicus
Lj1P877T22 Lonicera japonica
Lj4g0023106 Lotus japonicus
Lj8E171T0 Lonicera japonica
Lj8P171T25 Lonicera japonica
Lsat_1_v5_gn_2_40361 Lactuca sativa
Lsat_1_v5_gn_2_40421 Lactuca sativa
Manes.16G024900 Manihot esculenta
Mapoly0001s0024 Marchantia polymorpha
Mapoly0009s0176 Marchantia polymorpha
MBI04_g35990_MAGBIO Magnolia biondii
MBI04_g36401_MAGBIO Magnolia biondii
MBI16_g34925_MAGBIO Magnolia biondii
MBI16_g34928_MAGBIO Magnolia biondii
MD04G1191400 Malus domestica
MD05G1317500 Malus domestica
MD10G1061800 Malus domestica
Medtr4g032885 Medicago truncatula
Medtr4g089070 Medicago truncatula
Medtr7g099060 Medicago truncatula
MELO3C017564.2 Cucumis melo
Migut.M01180 Erythranthe guttata
Nitab4.5_0003347g0010 Nicotiana tabacum
Nitab4.5_0003668g0110 Nicotiana tabacum
Nn1g07800 Nelumbo nucifera
Oeu016117.1 Olea europaea
Oeu050830.1 Olea europaea
Os12g0535900 Oryza sativa ssp. japonica
Peaxi162Scf00379g00092 Petunia axillaris
PGR042G1300 Punica granatum
PGSC0003DMG400022434 Solanum tuberosum
Phvul.001G167200 Phaseolus vulgaris
Phvul.001G224300 Phaseolus vulgaris
Phvul.002G226300 Phaseolus vulgaris
Potri.004G039500 Populus trichocarpa
Potri.011G047900 Populus trichocarpa
Pp3c12_17420 Physcomitrium patens
PRCOL_00005809 Prasinoderma coloniale
Prupe.3G050300 Prunus persica
Prupe.6G309900 Prunus persica
Psat3g052160 Pisum sativum
Psat7g112160 Pisum sativum
Psat7g225840 Pisum sativum
PSO170G2796 Papaver somniferum
PSO210G5871 Papaver somniferum
QL03p016879 Quercus lobata
QL05p039342 Quercus lobata
QL10p057179 Quercus lobata
RcHm_v2.0_Chr3g0457571 Rosa chinensis
RcHm_v2.0_Chr5g0007801 Rosa chinensis
Rhsim02G0125200 Rhododendron simsii
Rhsim07G0025200 Rhododendron simsii
RhsimUnG0044100 Rhododendron simsii
Sabra04G0024300 Salix brachista
Sabra11G0033300 Salix brachista
SalBow8G3648 Salvia bowleyana
Sc05g0007850 Simmondsia chinensis
Sc06g0009130 Simmondsia chinensis
Sed0012938 Sechium edule
SEGI_13209 Sequoiadendron giganteum
SEGI_28495 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29640 Striga asiatica
SGA_v2.0_scaffold49G18283 Striga asiatica
SHI01836 Sapria himalayana
SMO118G0429 Selaginella moellendorffii
Solyc02g078580.1 Solanum lycopersicum
Sopen02g023440 Solanum pennellii
Sp2g03480 Schrenkiella parvula
TAR627G0572 Trochodendron aralioides
TAR629G2996 Trochodendron aralioides
THA.LOC104819165 Tarenaya hassleriana
Thecc.06G191600 Theobroma cacao
Thhalv10023338m.g Eutrema salsugineum
TPR.G12063 Trifolium pratense
TPR.G30857 Trifolium pratense
TPR.G34103 Trifolium pratense
TWI23G0181 Tripterygium wilfordii
unitig_748.g8020 Utricularia gibba
VMungo0251G3484 Vigna mungo
VMungo1383G2741 Vigna mungo
VMungo1383G3375 Vigna mungo
Zm00001eb087640 Zea mays
Zm00001eb137720 Zea mays
Zm00001eb410600 Zea mays

User provided reference genes

Program Settings