Gene: PGSC0003DMG400022434

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400022434
  • Transcript Identifier PGSC0003DMT400057785
  • Gene Type Coding gene
  • Location ST4.03ch02 : 34259380-34261338 : positive

Gene Family Information

  • ID HOM05D003743
  • #Genes/#Species 184/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37428256
  • id PGSC0003DMG400022434.v4.03
  • uniprot M1C1N5

Descriptions

  • Description RNA polymerase-associated protein RTF1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
IEA
GOA Databasepositive regulation of transcription, DNA-templated
GO:0009910
IEA
GOA Databasenegative regulation of flower development

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:1990269
IBA
GOA DatabaseRNA polymerase II C-terminal domain phosphoserine binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016593
IBA
IEA
GOA DatabaseCdc73/Paf1 complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004343 Plus-3 domain
IPR036128 Plus3-like superfamily
Mapman id Description
15.3.5.1.3 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.PAF1C transcription initiation and elongation complex.component VIP5/RTF1