Gene: Sopen02g023440

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g023440
  • Transcript Identifier Sopen02g023440.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 46824575-46826512 : positive

Gene Family Information

  • ID HOM05D003743
  • #Genes/#Species 184/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g023440.1

Descriptions

  • Description Encodes a yeast Paf1C subunit homolog required for the expression of the MADS box gene FLC and other members of the FLC/MAF MADS-box gene family. | vernalization independence 5 (VIP5) | FUNCTIONS IN: DNA binding | INVOLVED IN: positive regulation of transcription, DNA-dependent, negative regulation of flower development | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Plus-3 domain, subgroup , Plus-3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT1G61040
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT1G61040

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G61040
GO:0016593
ISO
PLAZA Integrative OrthologyCdc73/Paf1 complex AT1G61040

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004343 Plus-3 domain
IPR036128 Plus3-like superfamily
Mapman id Description
15.3.5.1.3 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.PAF1C transcription initiation and elongation complex.component VIP5/RTF1