Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p33960 Brassica napus
Aa31sc377G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2626 Anthoceros agrestis
Actinidia08073 Actinidia chinensis
Actinidia30650 Actinidia chinensis
Ah.01g020690 Amaranthus hybridus
AL1G56910 Arabidopsis lyrata
AL2G25920 Arabidopsis lyrata
AL7G43310 Arabidopsis lyrata
Aqoxy5G02771 Aquilegia oxysepala
Aqoxy7G01914 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3XH1N1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QLFJ9Y Arachis hypogaea
AT1G67370 Arabidopsis thaliana
AT4G32200 Arabidopsis thaliana
ATR0561G244 Amborella trichopoda
Atru.chr11.2319 Acer truncatum
AUR62008480 Chenopodium quinoa
AUR62021613 Chenopodium quinoa
AUR62027241 Chenopodium quinoa
BcaB03g15202 Brassica carinata
BcaB03g15203 Brassica carinata
BcaB05g22759 Brassica carinata
BcaC08g46167 Brassica carinata
BolC6t39148H Brassica oleracea
BraA07t31023Z Brassica rapa
C06p38720 Brassica napus
C06p42900 Brassica napus
CAN.G804.3 Capsicum annuum
CAN.G804.4 Capsicum annuum
CANSAT01G0850 Cannabis sativa
CARHR058050 Cardamine hirsuta
CARHR059910 Cardamine hirsuta
Carub.0002s1366 Capsella rubella
Ca_16461_v3 Cicer arietinum L.
CBR_g17956 Chara braunii
Cc09_g04930 Coffea canephora
CDE05G2922 Ceratophyllum demersum
Ciclev10033677m.g Citrus clementina
CiPaw.05G110100 Carya illinoinensis
ClCG08G017130 Citrullus lanatus
COL.COLO4_20397 Corchorus olitorius
COL.COLO4_20398 Corchorus olitorius
Cpa.g.sc43.54 Carica papaya
Cre10.g452550 Chlamydomonas reinhardtii
CsaV3_2G025450 Cucumis sativus L.
CSS0007637 Camellia sinensis var. sinensis
CSS0008698 Camellia sinensis var. sinensis
CSS0010492 Camellia sinensis var. sinensis
CSS0039632 Camellia sinensis var. sinensis
DCAR_026466 Daucus carota
Dinv10959 Davidia involucrata
ECA233G0767 Erigeron canadensis
EL10Ac6g13492 Beta vulgaris
FAN07G2055 Fragaria x ananassa
FAN12G2603 Fragaria x ananassa
FAN12G4010 Fragaria x ananassa
FAN12G4031 Fragaria x ananassa
FAN17G0970 Fragaria x ananassa
FAN22G0779 Fragaria x ananassa
FAN24G3534 Fragaria x ananassa
FvH4_2g22740 Fragaria vesca
FvH4_4g23791 Fragaria vesca
FvH4_4g23800 Fragaria vesca
Glyma.11G250351 Glycine max
Glyma.11G250400 Glycine max
Glyma.18G006800 Glycine max
Gohir.A03G126400 Gossypium hirsutum
Gohir.D02G149500 Gossypium hirsutum
Gorai.005G167400 Gossypium raimondii
GSVIVG01010478001 Vitis vinifera
GSVIVG01010479001 Vitis vinifera
HanXRQChr08g0207781 Helianthus annuus
Haze_12416 Corylus avellana
Hma1.2p1_0053F.1_g030850 Hydrangea macrophylla
Hma1.2p1_0200F.1_g085970 Hydrangea macrophylla
HPP92_003196 Vanilla planifolia
Hund06087 Selenicereus undatus
Lalb_Chr01g0009271 Lupinus albus
Lalb_Chr03g0034531 Lupinus albus
Lj1g0003468 Lotus japonicus
Lj1g0008936 Lotus japonicus
Lj3C1068T3 Lonicera japonica
Lj3g0010411 Lotus japonicus
Lsat_1_v5_gn_3_110541 Lactuca sativa
Lsat_1_v5_gn_8_147680 Lactuca sativa
Manes.12G011600 Manihot esculenta
Mapoly0003s0194 Marchantia polymorpha
MBI01_g03586_MAGBIO Magnolia biondii
MBI06_g20299_MAGBIO Magnolia biondii
MBI06_g32743_MAGBIO Magnolia biondii
MBI06_g32744_MAGBIO Magnolia biondii
MBI06_g46773_MAGBIO Magnolia biondii
MBI07_g38547_MAGBIO Magnolia biondii
MBI13_g14579_MAGBIO Magnolia biondii
MBI13_g41189_MAGBIO Magnolia biondii
MBI16_g19191_MAGBIO Magnolia biondii
MD13G1118700 Malus domestica
MD16G1118900 Malus domestica
Medtr3g085380 Medicago truncatula
MELO3C010743.2 Cucumis melo
Migut.C00176 Erythranthe guttata
Migut.K00732 Erythranthe guttata
Nitab4.5_0000767g0030 Nicotiana tabacum
Nitab4.5_0002119g0030 Nicotiana tabacum
Nitab4.5_0002441g0080 Nicotiana tabacum
Nitab4.5_0002699g0070 Nicotiana tabacum
Nitab4.5_0003884g0070 Nicotiana tabacum
Nitab4.5_0003981g0060 Nicotiana tabacum
Nn3g16465 Nelumbo nucifera
Oeu036873.1 Olea europaea
Oeu060814.1 Olea europaea
Os09g0506800 Oryza sativa ssp. japonica
Os12g0606600 Oryza sativa ssp. japonica
Peaxi162Scf00128g01233 Petunia axillaris
PGR102G1478 Punica granatum
PGSC0003DMG400029108 Solanum tuberosum
Phvul.001G261701 Phaseolus vulgaris
Potri.001G055201 Populus trichocarpa
Potri.003G173200 Populus trichocarpa
Pp3c5_4780 Physcomitrium patens
PRCOL_00002813 Prasinoderma coloniale
Prupe.1G226200 Prunus persica
Psat5g096280 Pisum sativum
PSO017G2483 Papaver somniferum
PSO063G2507 Papaver somniferum
PSO063G4593 Papaver somniferum
PSO170G3909 Papaver somniferum
PSO170G4962 Papaver somniferum
PSO339G0549 Papaver somniferum
PSO339G0625 Papaver somniferum
PSO339G4917 Papaver somniferum
PSO384G3745 Papaver somniferum
PSO478G4090 Papaver somniferum
PSO478G5007 Papaver somniferum
PSO561G0043 Papaver somniferum
PSO782G0388 Papaver somniferum
PSO782G1352 Papaver somniferum
PSO782G3500 Papaver somniferum
PSO832G0175 Papaver somniferum
QL03p052803 Quercus lobata
QL06p013707 Quercus lobata
QL10p034497 Quercus lobata
RcHm_v2.0_Chr4g0430291 Rosa chinensis
RcHm_v2.0_Chr4g0430321 Rosa chinensis
RcHm_v2.0_Chr4g0430331 Rosa chinensis
RcHm_v2.0_Chr4g0430341 Rosa chinensis
Rhsim02G0239300 Rhododendron simsii
Rhsim12G0026000 Rhododendron simsii
Sabra01G0039800 Salix brachista
Sabra03G0126700 Salix brachista
SalBow2G1610 Salvia bowleyana
Sc04g0010100 Simmondsia chinensis
Sed0012468 Sechium edule
Sed0021729 Sechium edule
SGA_v2.0_scaffold9G04687 Striga asiatica
SHI17966 Sapria himalayana
SHI17968 Sapria himalayana
SHI17969 Sapria himalayana
SHI18623 Sapria himalayana
SHI19516 Sapria himalayana
SMO116G0148 Selaginella moellendorffii
Solyc04g007330.3 Solanum lycopersicum
Solyc05g015360.2 Solanum lycopersicum
Solyc05g015370.3 Solanum lycopersicum
Solyc05g015380.2 Solanum lycopersicum
Sopen04g002390 Solanum pennellii
Sopen05g010640 Solanum pennellii
Sopen05g010660 Solanum pennellii
Sopen05g010670 Solanum pennellii
Sp5g22320 Schrenkiella parvula
TAR374G1082 Trochodendron aralioides
TAR622G1117 Trochodendron aralioides
THA.LOC104825509 Tarenaya hassleriana
Thecc.02G209200 Theobroma cacao
Thhalv10018311m.g Eutrema salsugineum
TPR.G28283 Trifolium pratense
TPR.G40282 Trifolium pratense
TWI75G0323 Tripterygium wilfordii
unitig_8.g3138 Utricularia gibba
vmacro01061 Vaccinium macrocarpon
vmacro01062 Vaccinium macrocarpon
vmacro18929 Vaccinium macrocarpon
VMungo1383G3407 Vigna mungo
Zm00001eb102420 Zea mays

User provided reference genes

Program Settings