Gene: Nitab4.5_0002441g0080

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0002441g0080
  • Transcript Identifier Nitab4.5_0002441g0080.1
  • Gene Type Coding gene
  • Location Nitab4.5_0002441 : 217619-229738 : negative

Gene Family Information

  • ID HOM05D003724
  • #Genes/#Species 185/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0002441g0080.1
  • SR1-identifier Nta06g29970.1

Descriptions

  • Description DNA-binding HORMA, Winged helix-turn-helix DNA-binding domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051026
ISO
PLAZA Integrative Orthologychiasma assembly AT1G67370
GO:0007130
ISO
PLAZA Integrative Orthologysynaptonemal complex assembly AT4G32200
GO:0009556
ISO
PLAZA Integrative Orthologymicrosporogenesis Os09g0506800
GO:0009554
ISO
PLAZA Integrative Orthologymegasporogenesis Os09g0506800
GO:0007129
ISO
PLAZA Integrative Orthologyhomologous chromosome pairing at meiosis AT1G67370

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G67370

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os09g0506800
GO:0000228
ISO
PLAZA Integrative Orthologynuclear chromosome Os09g0506800
GO:0005694
ISO
PLAZA Integrative Orthologychromosome AT1G67370
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT1G67370
GO:0000794
ISO
PLAZA Integrative Orthologycondensed nuclear chromosome AT1G67370
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT1G67370

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003511 HORMA domain
IPR036570 HORMA domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
13.3.5.1.4 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic initiation.homolog pairing factor (ASY1)