Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p17230 Brassica napus
A10p14580 Brassica napus
Aa31LG1G5930 Aethionema arabicum
Aa31LG3G13090 Aethionema arabicum
Aa31LG3G330 Aethionema arabicum
Aa31LG6G2040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3970 Anthoceros agrestis
Actinidia00242 Actinidia chinensis
Actinidia38967 Actinidia chinensis
AL161U10010 Arabidopsis lyrata
AL7G27030 Arabidopsis lyrata
AL8G33150 Arabidopsis lyrata
Aqoxy6G00354 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3Q8P58 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4105RR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F2S38R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UIRN9X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XM8XEN Arachis hypogaea
AT4G25970 Arabidopsis thaliana
AT5G57190 Arabidopsis thaliana
ATR1136G049 Amborella trichopoda
Atru.chr6.881 Acer truncatum
AUR62003395 Chenopodium quinoa
AUR62004784 Chenopodium quinoa
BcaB08g36077 Brassica carinata
BcaC04g19991 Brassica carinata
BcaC04g22352 Brassica carinata
BcaC07g37664 Brassica carinata
BcaC09g50725 Brassica carinata
BcaNung03773 Brassica carinata
BolC1t02078H Brassica oleracea
BolC7t41195H Brassica oleracea
BolC7t41196H Brassica oleracea
BolC9t54929H Brassica oleracea
BolC9t57753H Brassica oleracea
BraA01t01679Z Brassica rapa
BraA10t43545Z Brassica rapa
C01p21590 Brassica napus
C07p07750 Brassica napus
C07p07760 Brassica napus
C07p07770 Brassica napus
C07p07780 Brassica napus
C09p20220 Brassica napus
C09p20230 Brassica napus
C09p49020 Brassica napus
CAN.G523.97 Capsicum annuum
CANSAT11G0919 Cannabis sativa
CANSAT11G1106 Cannabis sativa
CARHR233480 Cardamine hirsuta
CARHR270980 Cardamine hirsuta
Carub.0007s1498 Capsella rubella
Carub.0008s1770 Capsella rubella
Ca_00113_v3 Cicer arietinum L.
Ca_29382_v3 Cicer arietinum L.
CBR_g4358 Chara braunii
CBR_g4360 Chara braunii
CBR_g85559 Chara braunii
Cc02_g21930 Coffea canephora
Cc02_g21940 Coffea canephora
CDE06G2443 Ceratophyllum demersum
CDE08G1148 Ceratophyllum demersum
Cfa005564 Carpinus fangiana
Ciclev10000710m.g Citrus clementina
Ciclev10002987m.g Citrus clementina
CiPaw.05G039200 Carya illinoinensis
ClCG09G013430 Citrullus lanatus
COL.COLO4_20874 Corchorus olitorius
Cpa.g.sc2.53 Carica papaya
Cpa.g.sc845.5 Carica papaya
Cre02.g119600 Chlamydomonas reinhardtii
CsaV3_3G020620 Cucumis sativus L.
CsaV3_6G003040 Cucumis sativus L.
CsaV3_6G003050 Cucumis sativus L.
CsaV3_7G006180 Cucumis sativus L.
CSS0011415 Camellia sinensis var. sinensis
CSS0027167 Camellia sinensis var. sinensis
DCAR_001444 Daucus carota
Dinv24229 Davidia involucrata
Dinv24230 Davidia involucrata
Duzib132G0147 Durio zibethinus
ECA236G2397 Erigeron canadensis
ECA240G1941 Erigeron canadensis
EL10Ac4g08941 Beta vulgaris
Eucgr.G00656 Eucalyptus grandis
FAN04G1518 Fragaria x ananassa
FAN08G3618 Fragaria x ananassa
FAN13G1243 Fragaria x ananassa
FAN18G1779 Fragaria x ananassa
FvH4_5g30530 Fragaria vesca
Glyma.03G071101 Glycine max
Glyma.08G181200 Glycine max
Glyma.15G051100 Glycine max
Gohir.A12G013800 Gossypium hirsutum
Gohir.A12G013866 Gossypium hirsutum
Gohir.D12G014500 Gossypium hirsutum
Gorai.008G014600 Gossypium raimondii
GSVIVG01010110001 Vitis vinifera
GSVIVG01029732001 Vitis vinifera
GSVIVG01029733001 Vitis vinifera
GSVIVG01029735001 Vitis vinifera
GSVIVG01038340001 Vitis vinifera
HanXRQChr03g0065791 Helianthus annuus
HanXRQChr04g0126841 Helianthus annuus
HanXRQChr11g0337651 Helianthus annuus
Haze_10763 Corylus avellana
Haze_10767 Corylus avellana
Haze_10769 Corylus avellana
Haze_10770 Corylus avellana
HPP92_019398 Vanilla planifolia
Hund22189 Selenicereus undatus
Hund22190 Selenicereus undatus
Lalb_Chr18g0060681 Lupinus albus
Lalb_Chr24g0403011 Lupinus albus
Lalb_Chr25g0281381 Lupinus albus
Lj5C243G7 Lonicera japonica
Lj5C243T9 Lonicera japonica
Lj6g0005534 Lotus japonicus
Lj6g0009012 Lotus japonicus
Lsat_1_v5_gn_2_44401 Lactuca sativa
Lsat_1_v5_gn_4_179761 Lactuca sativa
Lsat_1_v5_gn_7_80501 Lactuca sativa
Lsat_1_v5_gn_9_117920 Lactuca sativa
Manes.07G024800 Manihot esculenta
Manes.10G117200 Manihot esculenta
Mapoly0064s0044 Marchantia polymorpha
MBI06_g29671_MAGBIO Magnolia biondii
MD08G1222700 Malus domestica
Medtr2g008190 Medicago truncatula
Medtr7g104390 Medicago truncatula
MELO3C003259.2 Cucumis melo
MELO3C018674.2 Cucumis melo
MELO3C026793.2 Cucumis melo
Migut.B00642 Erythranthe guttata
Migut.B00643 Erythranthe guttata
MSTRG.16561 Avicennia marina
Nitab4.5_0007987g0020 Nicotiana tabacum
Nitab4.5_0008610g0050 Nicotiana tabacum
Nn1g06259 Nelumbo nucifera
Oeu037206.2 Olea europaea
Oeu047368.1 Olea europaea
Oeu047369.1 Olea europaea
Oeu047370.1 Olea europaea
Os01g0959800 Oryza sativa ssp. japonica
Peaxi162Scf00001g00523 Petunia axillaris
Peaxi162Scf00152g01227 Petunia axillaris
PGR042G1212 Punica granatum
Phvul.006G208800 Phaseolus vulgaris
Potri.001G172400 Populus trichocarpa
Potri.003G061700 Populus trichocarpa
Pp3c15_7420 Physcomitrium patens
Pp3s32_287 Physcomitrium patens
PRCOL_00006167 Prasinoderma coloniale
Prupe.1G560600 Prunus persica
Psat1g218440 Pisum sativum
PSO541G1613 Papaver somniferum
PSO675G2802 Papaver somniferum
QL02p098754 Quercus lobata
QL08p057600 Quercus lobata
RcHm_v2.0_Chr7g0225351 Rosa chinensis
Rhsim11G0134200 Rhododendron simsii
Sabra01G0139300 Salix brachista
Sabra03G0035800 Salix brachista
SalBow5G0451 Salvia bowleyana
SalBow5G2235 Salvia bowleyana
SalBow5G2754 Salvia bowleyana
Sc09g0004430 Simmondsia chinensis
Sed0005951 Sechium edule
SEGI_17560 Sequoiadendron giganteum
SEGI_27738 Sequoiadendron giganteum
SEGI_34524 Sequoiadendron giganteum
SGA_v2.0_scaffold83G26271 Striga asiatica
SMO244G0007 Selaginella moellendorffii
Solyc01g104880.3 Solanum lycopersicum
Sopen01g047400 Solanum pennellii
Sp6g18920 Schrenkiella parvula
Sp7g23980 Schrenkiella parvula
TAR625G1066 Trochodendron aralioides
THA.LOC104811774 Tarenaya hassleriana
THA.LOC104817775 Tarenaya hassleriana
Thecc.02G144000 Theobroma cacao
Thhalv10012950m.g Eutrema salsugineum
Thhalv10024661m.g Eutrema salsugineum
TPR.G19731 Trifolium pratense
TWI14G0354 Tripterygium wilfordii
vmacro01806 Vaccinium macrocarpon
VMungo0540G0770 Vigna mungo
Zm00001eb011090 Zea mays
Zm00001eb141090 Zea mays
Zm00001eb362570 Zea mays

User provided reference genes

Program Settings