Gene: Sopen01g047400

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g047400
  • Transcript Identifier Sopen01g047400.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 103816472-103831710 : negative

Gene Family Information

  • ID HOM05D003620
  • #Genes/#Species 189/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g047400.1

Descriptions

  • Description Encodes the minor form of the two non-mitochondrail phosphatidylserine decarboxylase. The gene expression level is very low. Located at the tonoplast. | phosphatidylserine decarboxylase 2 (PSD2) | FUNCTIONS IN: phosphatidylserine decarboxylase activity | INVOLVED IN: N-terminal protein myristoylation, phospholipid biosynthetic process | LOCATED IN: plant-type vacuole membrane | EXPRESSED IN: 13 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site , EF-HAND 2 , Phosphatidylserine decarboxylase-related , Calcium-binding EF-hand , C2 calcium/lipid-binding domain, CaLB , EF-hand-like domain , Phosphatidylserine decarboxylase | BEST Arabidopsis thaliana protein match is: phosphatidylserine decarboxylase 3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008654
IEA
InterProphospholipid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004609
IEA
InterProphosphatidylserine decarboxylase activity
GO:0005509
IEA
InterProcalcium ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009705
ISO
PLAZA Integrative Orthologyplant-type vacuole membrane AT5G57190
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT4G25970

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000008 C2 domain
IPR011992 EF-hand domain pair
IPR033177 Phosphatidylserine decarboxylase
IPR003817 Phosphatidylserine decarboxylase-related
IPR002048 EF-hand domain
IPR035892 C2 domain superfamily
Mapman id Description
5.2.4.2.1 Lipid metabolism.glycerolipid biosynthesis.phosphatidylethanolamine.extramitochondrial phosphatidylserine decarboxylation pathway.phosphatidylserine decarboxylase