Gene: AT4G25970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G25970
  • Transcript Identifier AT4G25970.1
  • Gene Type Coding gene
  • Location Chr4 : 13184240-13189139 : positive

Gene Family Information

  • ID HOM05D003620
  • #Genes/#Species 189/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G25970.1
  • symbol PSD3
  • uniprot A4GNA8

Descriptions

  • Description phosphatidylserine decarboxylase 3
  • Computational description phosphatidylserine decarboxylase 3 (PSD3); FUNCTIONS IN: phosphatidylserine decarboxylase activity; INVOLVED IN: N-terminal protein myristoylation, phospholipid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Phosphatidylserine decarboxylase-related (InterPro:IPR003817), EF-HAND 2 (InterPro:IPR018249), Phosphatidylserine decarboxylase (InterPro:IPR005221); BEST Arabidopsis thaliana protein match is: phosphatidylserine decarboxylase 2 (TAIR:AT5G57190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016540
IEA
GOA Databaseprotein autoprocessing
GO:0008654
IEA
GOA Databasephospholipid biosynthetic process
GO:0008654
IEA
InterProphospholipid biosynthetic process
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0006646
IBA
IEA
Gene Ontologyphosphatidylethanolamine biosynthetic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
Gene Ontologycalcium ion binding
GO:0005509
IEA
InterProcalcium ion binding
GO:0004609
IEA
GOA Databasephosphatidylserine decarboxylase activity
GO:0004609
IDA, IGI
IBA
Gene Ontologyphosphatidylserine decarboxylase activity1 2
GO:0004609
IEA
InterProphosphatidylserine decarboxylase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0016831
IEA
GOA Databasecarboxy-lyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005783
IDA
Gene Ontologyendoplasmic reticulum2
GO:0016020
IEA
GOA Databasemembrane
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0005829
HDA
Gene Ontologycytosol3
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003817 Phosphatidylserine decarboxylase-related
IPR033177 Phosphatidylserine decarboxylase
IPR035892 C2 domain superfamily
IPR011992 EF-hand domain pair
IPR002048 EF-hand domain
Mapman id Description
5.2.4.2.1 Lipid metabolism.glycerolipid biosynthesis.phosphatidylethanolamine.extramitochondrial phosphatidylserine decarboxylation pathway.phosphatidylserine decarboxylase