Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p40160 Brassica napus
A10p32060 Brassica napus
Aa31LG1G21260 Aethionema arabicum
Aa31LG4G4600 Aethionema arabicum
Actinidia06613 Actinidia chinensis
Actinidia39178 Actinidia chinensis
Ah.02g121610 Amaranthus hybridus
Ah.13g076640 Amaranthus hybridus
AL2G34200 Arabidopsis lyrata
AL6G13670 Arabidopsis lyrata
Aqoxy5G04186 Aquilegia oxysepala
Aqoxy6G00302 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8A3W3K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MR16VB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P66LNP Arachis hypogaea
AT1G74350 Arabidopsis thaliana
AT5G04050 Arabidopsis thaliana
ATR0580G046 Amborella trichopoda
ATR0691G002 Amborella trichopoda
ATR1101G023 Amborella trichopoda
Atru.chr1.1276 Acer truncatum
Atru.chr1.3323 Acer truncatum
Atru.chr12.158 Acer truncatum
Atru.chr4.881 Acer truncatum
AUR62003572 Chenopodium quinoa
AUR62017887 Chenopodium quinoa
AUR62026155 Chenopodium quinoa
AUR62037179 Chenopodium quinoa
BcaC06g32109 Brassica carinata
BcaC08g46865 Brassica carinata
BolC6t39880H Brassica oleracea
BolC9t60016H Brassica oleracea
BraA07t31560Z Brassica rapa
BraA10t45251Z Brassica rapa
C06p48510 Brassica napus
C09p72780 Brassica napus
CAN.G1237.32 Capsicum annuum
CAN.G397.92 Capsicum annuum
CANSAT11G2476 Cannabis sativa
CANSAT54G1064 Cannabis sativa
CARHR067610 Cardamine hirsuta
Carub.0006s0300 Capsella rubella
Ca_00254_v3 Cicer arietinum L.
Ca_02700_v3 Cicer arietinum L.
CDE05G2135 Ceratophyllum demersum
Cfa002904 Carpinus fangiana
Cfa016733 Carpinus fangiana
Ciclev10003761m.g Citrus clementina
CiPaw.09G043900 Carya illinoinensis
ClCG04G005530 Citrullus lanatus
ClCG10G005410 Citrullus lanatus
COL.COLO4_33914 Corchorus olitorius
COL.COLO4_35758 Corchorus olitorius
Cpa.g.sc161.31 Carica papaya
Cpa.g.sc42.164 Carica papaya
CsaV3_3G005150 Cucumis sativus L.
CsaV3_4G012020 Cucumis sativus L.
CSS0031196 Camellia sinensis var. sinensis
CSS0046512 Camellia sinensis var. sinensis
DCAR_014331 Daucus carota
DCAR_016966 Daucus carota
Dinv00797 Davidia involucrata
Dinv04144 Davidia involucrata
Dinv07113 Davidia involucrata
Duzib128G0580 Durio zibethinus
ECA233G5653 Erigeron canadensis
ECA248G3258 Erigeron canadensis
EL10Ac3g07183 Beta vulgaris
FAN02G3060 Fragaria x ananassa
FAN03G2482 Fragaria x ananassa
FAN06G2474 Fragaria x ananassa
FAN09G2704 Fragaria x ananassa
FAN14G1287 Fragaria x ananassa
FvH4_6g25070 Fragaria vesca
FvH4_6g25071 Fragaria vesca
FvH4_7g02870 Fragaria vesca
Glyma.16G116350 Glycine max
Glyma.16G222000 Glycine max
Glyma.17G135400 Glycine max
Gohir.A09G213532 Gossypium hirsutum
Gohir.D09G211130 Gossypium hirsutum
GSVIVG01033568001 Vitis vinifera
HanXRQChr13g0395821 Helianthus annuus
HanXRQChr17g0536801 Helianthus annuus
Haze_19741 Corylus avellana
Haze_25257 Corylus avellana
HPP92_012753 Vanilla planifolia
HPP92_024090 Vanilla planifolia
Lalb_Chr02g0142191 Lupinus albus
Lalb_Chr21g0312211 Lupinus albus
Lj1C1119T2 Lonicera japonica
Lj1P1115T19 Lonicera japonica
Lj3g0020898 Lotus japonicus
Lj4C836G14 Lonicera japonica
Lsat_1_v5_gn_5_158800 Lactuca sativa
Lsat_1_v5_gn_6_112880 Lactuca sativa
Manes.08G056200 Manihot esculenta
Manes.09G100100 Manihot esculenta
MBI14_g19444_MAGBIO Magnolia biondii
MD02G1287300 Malus domestica
MD12G1089700 Malus domestica
MELO3C008840.2 Cucumis melo
MELO3C025378.2 Cucumis melo
Migut.L01806 Erythranthe guttata
MSTRG.10382 Avicennia marina
Nitab4.5_0000573g0140 Nicotiana tabacum
Nitab4.5_0005031g0070 Nicotiana tabacum
Nitab4.5_0010525g0010 Nicotiana tabacum
Nn1g04314 Nelumbo nucifera
Nn3g18642 Nelumbo nucifera
Oeu008197.1 Olea europaea
Os06g0634100 Oryza sativa ssp. japonica
Os06g0659200 Oryza sativa ssp. japonica
Peaxi162Scf00130g01210 Petunia axillaris
PGR119G0394 Punica granatum
PGR142G0250 Punica granatum
PGSC0003DMG400008935 Solanum tuberosum
PGSC0003DMG400022532 Solanum tuberosum
Phvul.003G215300 Phaseolus vulgaris
Potri.005G063750 Populus trichocarpa
Potri.006G043650 Populus trichocarpa
Pp3c15_3410 Physcomitrium patens
Pp3c2_27600 Physcomitrium patens
Prupe.2G034000 Prunus persica
Prupe.3G158600 Prunus persica
Prupe.7G047200 Prunus persica
Psat5g223160 Pisum sativum
Psat6g087880 Pisum sativum
PSO017G0346 Papaver somniferum
PSO017G1060 Papaver somniferum
PSO017G5444 Papaver somniferum
QL03p003467 Quercus lobata
QL03p003469 Quercus lobata
QL03p003473 Quercus lobata
QL03p003745 Quercus lobata
QL03p003747 Quercus lobata
QL07p005711 Quercus lobata
QL07p005715 Quercus lobata
QL07p006066 Quercus lobata
QL07p006078 Quercus lobata
QL07p006290 Quercus lobata
QL07p006514 Quercus lobata
QL10p043434 Quercus lobata
QL11p043104 Quercus lobata
QL11p043133 Quercus lobata
RcHm_v2.0_Chr1g0323821 Rosa chinensis
RcHm_v2.0_Chr2g0124831 Rosa chinensis
Rhsim03G0033800 Rhododendron simsii
Rhsim10G0133200 Rhododendron simsii
Rhsim10G0133500 Rhododendron simsii
Rhsim10G0133600 Rhododendron simsii
Rhsim10G0199100 Rhododendron simsii
Sabra05G0053000 Salix brachista
Sabra06G0029800 Salix brachista
Sc03g0004310 Simmondsia chinensis
Sc13g0001410 Simmondsia chinensis
Sed0022963 Sechium edule
SEGI_08289 Sequoiadendron giganteum
SEGI_09252 Sequoiadendron giganteum
SEGI_12312 Sequoiadendron giganteum
SGA_v2.0_scaffold35G14037 Striga asiatica
SGA_v2.0_scaffold94G28503 Striga asiatica
SHI03570 Sapria himalayana
SHI13956 Sapria himalayana
Solyc03g033520.2 Solanum lycopersicum
Solyc09g010285.1 Solanum lycopersicum
Sopen03g006270 Solanum pennellii
Sopen09g004990 Solanum pennellii
Sp5g29510 Schrenkiella parvula
Sp6g38700 Schrenkiella parvula
TAR580G0003 Trochodendron aralioides
TAR628G1743 Trochodendron aralioides
THA.LOC104823214 Tarenaya hassleriana
Thhalv10012522m.g Eutrema salsugineum
TPR.G13793 Trifolium pratense
TPR.G1400 Trifolium pratense
TPR.G5668 Trifolium pratense
TWI74G0330 Tripterygium wilfordii
TWI74G0358 Tripterygium wilfordii
unitig_748.g7230 Utricularia gibba
unitig_748.g7231 Utricularia gibba
unitig_8.g4728 Utricularia gibba
vmacro12792 Vaccinium macrocarpon
vmacro23496 Vaccinium macrocarpon
VMungo0331G0942 Vigna mungo
VMungo0720G1667 Vigna mungo
VMungo1127G0235 Vigna mungo
VMungo1215G0817 Vigna mungo
Zm00001eb274760 Zea mays
Zm00001eb387540 Zea mays

User provided reference genes

Program Settings