Gene: AT1G74350

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G74350
  • Transcript Identifier AT1G74350.1
  • Gene Type Coding gene
  • Location Chr1 : 27949022-27951283 : negative

Gene Family Information

  • ID HOM05D003614
  • #Genes/#Species 190/85
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G74350.1
  • uniprot Q9CA78

Descriptions

  • Description Intron maturase, type II family protein
  • Computational description Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, shoot apex, stem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase) (TAIR:AT5G04050.1); Has 3669 Blast hits to 3587 proteins in 1202 species: Archae - 32; Bacteria - 2608; Metazoa - 4; Fungi - 43; Plants - 874; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090615
IMP
ISS, IBA
Gene Ontologymitochondrial mRNA processing1 2
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0006397
IEA
InterPromRNA processing
GO:0006314
IEA
GOA Databaseintron homing
GO:0006278
IEA
GOA DatabaseRNA-dependent DNA biosynthetic process
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0006315
IBA
Gene Ontologyhoming of group II introns1
GO:0000373
IMP
ISS
Gene OntologyGroup II intron splicing2
GO:1900864
IMP
Gene Ontologymitochondrial RNA modification2
GO:0090351
IMP
Gene Ontologyseedling development2
GO:0032885
IMP
Gene Ontologyregulation of polysaccharide biosynthetic process2
GO:0009845
IMP
Gene Ontologyseed germination2
GO:0007005
IMP
Gene Ontologymitochondrion organization2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003964
IBA
Gene OntologyRNA-directed DNA polymerase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IEA
GOA Databaseplastid
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA, IMP
IBA
Gene Ontologymitochondrion1 2 3
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA
ISM
Gene Ontologychloroplast3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024937 Domain X
IPR000477 Reverse transcriptase domain
Mapman id Description
16.11.4.2.1.3 RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.group-II intron splicing.type-II splicing factor (nMAT3/4)