Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p15280 Brassica napus
A09p25340 Brassica napus
Aa31LG9G9160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4774 Anthoceros agrestis
Actinidia07464 Actinidia chinensis
Actinidia23238 Actinidia chinensis
Actinidia23239 Actinidia chinensis
Ah.14g086230 Amaranthus hybridus
AL5G26110 Arabidopsis lyrata
AL6G49010 Arabidopsis lyrata
AL7G33030 Arabidopsis lyrata
Aqoxy1G01653 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1CC5MB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.92D3LZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UWD6C2 Arachis hypogaea
AT4G05420 Arabidopsis thaliana
AT4G21100 Arabidopsis thaliana
ATR0594G240 Amborella trichopoda
Atru.chr10.947 Acer truncatum
Atru.chr10.953 Acer truncatum
Atru.chr10.954 Acer truncatum
Atru.chr10.957 Acer truncatum
AUR62042468 Chenopodium quinoa
AUR62042762 Chenopodium quinoa
BcaB01g02548 Brassica carinata
BcaC01g00713 Brassica carinata
BcaC01g00716 Brassica carinata
BcaC01g03280 Brassica carinata
BcaC01g03282 Brassica carinata
BcaC04g21393 Brassica carinata
BolC3t17688H Brassica oleracea
BolC3t17689H Brassica oleracea
BolC3t17691H Brassica oleracea
BolC3t17696H Brassica oleracea
BolC3t20633H Brassica oleracea
BolC9t56079H Brassica oleracea
BraA08t33506Z Brassica rapa
BraA09t38116Z Brassica rapa
C03p36590 Brassica napus
C03p54000 Brassica napus
C03p54010 Brassica napus
C03p83520 Brassica napus
C09p32340 Brassica napus
CAN.G1126.16 Capsicum annuum
CAN.G1437.4 Capsicum annuum
CAN.G17019.1 Capsicum annuum
CAN.G17306.1 Capsicum annuum
CAN.G371.123 Capsicum annuum
CANSAT35G1843 Cannabis sativa
CARHR131210 Cardamine hirsuta
CARHR227680 Cardamine hirsuta
CARHR252160 Cardamine hirsuta
Carub.0006s3125 Capsella rubella
Carub.0006s3333 Capsella rubella
Carub.0007s2033 Capsella rubella
Ca_17799_v3 Cicer arietinum L.
Ca_25834_v3 Cicer arietinum L.
CBR_g19725 Chara braunii
CDE01G0431 Ceratophyllum demersum
CDE01G0609 Ceratophyllum demersum
CDE02G3832 Ceratophyllum demersum
Cfa000850 Carpinus fangiana
Cfa022275 Carpinus fangiana
Ciclev10014106m.g Citrus clementina
CiPaw.10G086600 Carya illinoinensis
ClCG03G006390 Citrullus lanatus
COL.COLO4_17669 Corchorus olitorius
Cpa.g.c32775 Carica papaya
Cpa.g.sc17.69 Carica papaya
Cre10.g432000 Chlamydomonas reinhardtii
CsaV3_1G037020 Cucumis sativus L.
CSS0002848 Camellia sinensis var. sinensis
CSS0015242 Camellia sinensis var. sinensis
CSS0039412 Camellia sinensis var. sinensis
DCAR_027872 Daucus carota
Dinv32197 Davidia involucrata
Duzib132G0117 Durio zibethinus
Duzib132G1150 Durio zibethinus
Duzib248G1499 Durio zibethinus
ECA236G2324 Erigeron canadensis
EL10Ac8g19595 Beta vulgaris
EL10Ac8g19982 Beta vulgaris
EL10Ac9g22433 Beta vulgaris
Eucgr.H04822 Eucalyptus grandis
FAN11G0451 Fragaria x ananassa
FAN16G3689 Fragaria x ananassa
FAN21G1100 Fragaria x ananassa
FAN25G3439 Fragaria x ananassa
FvH4_3g09700 Fragaria vesca
Glyma.08G129900 Glycine max
Glyma.12G078300 Glycine max
Glyma.12G078302 Glycine max
Glyma.12G078402 Glycine max
Glyma.12G106200 Glycine max
Glyma.U031908 Glycine max
Glyma.U032008 Glycine max
Gohir.A03G216700 Gossypium hirsutum
Gohir.D02G238300 Gossypium hirsutum
Gorai.005G266800 Gossypium raimondii
GSVIVG01021587001 Vitis vinifera
HanXRQChr04g0113571 Helianthus annuus
HanXRQChr15g0481541 Helianthus annuus
Haze_05753 Corylus avellana
Haze_26269 Corylus avellana
Hma1.2p1_1418F.1_g282240 Hydrangea macrophylla
HPP92_020750 Vanilla planifolia
Hund21559 Selenicereus undatus
Lalb_Chr07g0185651 Lupinus albus
Lalb_Chr13g0295791 Lupinus albus
Lj2C325T8 Lonicera japonica
Lj4g0011653 Lotus japonicus
Lj4g0015667 Lotus japonicus
Lj6g0025210 Lotus japonicus
Lsat_1_v5_gn_4_183721 Lactuca sativa
Lsat_1_v5_gn_7_31981 Lactuca sativa
Lsat_1_v5_gn_8_16520 Lactuca sativa
Manes.06G061000 Manihot esculenta
Manes.18G124850 Manihot esculenta
Mapoly0054s0064 Marchantia polymorpha
MBI18_g10584_MAGBIO Magnolia biondii
MCO15G425 Micromonas commoda
MD00G1109600 Malus domestica
MD05G1276000 Malus domestica
Medtr8g089380 Medicago truncatula
MELO3C002793.2 Cucumis melo
Migut.J01122 Erythranthe guttata
Migut.M01878 Erythranthe guttata
MSTRG.16279 Avicennia marina
Nitab4.5_0000100g0230 Nicotiana tabacum
Nitab4.5_0001633g0010 Nicotiana tabacum
Nitab4.5_0005101g0010 Nicotiana tabacum
Nn2g14648 Nelumbo nucifera
Nn7g36935 Nelumbo nucifera
Oeu015191.1 Olea europaea
Os01g0585400 Oryza sativa ssp. japonica
Os05g0592400 Oryza sativa ssp. japonica
Peaxi162Scf00155g01114 Petunia axillaris
Peaxi162Scf00213g01216 Petunia axillaris
Peaxi162Scf00296g01317 Petunia axillaris
PGR031G0855 Punica granatum
PGSC0003DMG400003744 Solanum tuberosum
Phvul.002G252300 Phaseolus vulgaris
Potri.001G357900 Populus trichocarpa
Pp3c15_18160 Physcomitrium patens
Pp3c9_22270 Physcomitrium patens
PRCOL_00006815 Prasinoderma coloniale
Prupe.4G088300 Prunus persica
Psat0s2295g0160 Pisum sativum
Psat7g060520 Pisum sativum
PSO541G5911 Papaver somniferum
PSO675G5242 Papaver somniferum
QL07p044690 Quercus lobata
QL11p001509 Quercus lobata
QL11p001978 Quercus lobata
RcHm_v2.0_Chr5g0015371 Rosa chinensis
Rhsim13G0119500 Rhododendron simsii
Sabra16G0235700 Salix brachista
SalBow8G0777 Salvia bowleyana
Sc17g0004700 Simmondsia chinensis
Sed0022224 Sechium edule
SEGI_12143 Sequoiadendron giganteum
SEGI_12709 Sequoiadendron giganteum
SGA_v2.0_scaffold139G35343 Striga asiatica
SGA_v2.0_scaffold1G00234 Striga asiatica
SGA_v2.0_scaffold223G42845 Striga asiatica
SGA_v2.0_scaffold5530G54650 Striga asiatica
SGA_v2.0_scaffold834G53652 Striga asiatica
SHI01957 Sapria himalayana
SMO119G0053 Selaginella moellendorffii
Solyc02g021650.3 Solanum lycopersicum
Sopen02g006220 Solanum pennellii
Sp6g03670 Schrenkiella parvula
Sp7g19180 Schrenkiella parvula
TAR624G1151 Trochodendron aralioides
TAR626G0448 Trochodendron aralioides
THA.LOC104812376 Tarenaya hassleriana
Thecc.02G010900 Theobroma cacao
Thhalv10024273m.g Eutrema salsugineum
Thhalv10028374m.g Eutrema salsugineum
TPR.G4955 Trifolium pratense
TPR.G6260 Trifolium pratense
TWI73G0261 Tripterygium wilfordii
vmacro03407 Vaccinium macrocarpon
VMungo0251G1043 Vigna mungo
VMungo0464G0096 Vigna mungo
VMungo0464G0289 Vigna mungo
VMungo0464G0798 Vigna mungo
VMungo0464G1465 Vigna mungo
Zm00001eb297320 Zea mays
Zm00001eb345240 Zea mays

User provided reference genes

Program Settings