Gene: Duzib132G0117

General Information

Structural Information

  • Species Durio zibethinus
  • Gene Identifier Duzib132G0117
  • Transcript Identifier Duzib132G0117.04
  • Gene Type Coding gene
  • Location NW_019167915.1 : 530981-538908 : positive

Gene Family Information

  • ID HOM05D003609
  • #Genes/#Species 190/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name LOC111308546
  • name XM_022906923.1
  • pid XP_022762658.1
  • id gene-LOC111308546
  • uniprot A0A6P6AD00

Descriptions

  • product DNA damage-binding protein 1a-like, transcript variant X3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT4G05420
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G21100
GO:0010100
ISO
PLAZA Integrative Orthologynegative regulation of photomorphogenesis AT4G05420

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
IEA
InterProprotein binding
GO:0003684
ISO
PLAZA Integrative Orthologydamaged DNA binding Os05g0592400

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G05420
GO:0080008
ISO
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex AT4G05420

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018846 Cleavage/polyadenylation specificity factor, A subunit, N-terminal
IPR004871 Cleavage/polyadenylation specificity factor, A subunit, C-terminal
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
14.6.1.3.1 DNA damage response.nucleotide excision repair (NER).global genome nucleotide excision repair (GG-NER).UV-damaged DNA-binding protein (UV-DDB) heterodimer.ubiquitination complex adapter component DDB1
19.2.2.8.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.core adapter component DDB1