Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p11150 Brassica napus
A08p25480 Brassica napus
A09p37550 Brassica napus
Aa31LG6G11010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1817 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.813 Anthoceros agrestis
Actinidia28974 Actinidia chinensis
Actinidia30222 Actinidia chinensis
AL1G42100 Arabidopsis lyrata
Aqoxy1G04249 Aquilegia oxysepala
Aqoxy6G01555 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3L4J3R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NDA9EK Arachis hypogaea
AT1G28490 Arabidopsis thaliana
ATR0681G197 Amborella trichopoda
Atru.chr11.1823 Acer truncatum
Atru.chr2.3484 Acer truncatum
AUR62037629 Chenopodium quinoa
AUR62039177 Chenopodium quinoa
BcaB03g12101 Brassica carinata
BcaB03g13924 Brassica carinata
BcaB07g32470 Brassica carinata
BcaC01g00063 Brassica carinata
BcaC05g26899 Brassica carinata
BcaC06g35375 Brassica carinata
BolC3t19791H Brassica oleracea
BolC5t31469H Brassica oleracea
BolC7t42188H Brassica oleracea
BraA07t28906Z Brassica rapa
BraA08t34499Z Brassica rapa
BraA09t39265Z Brassica rapa
C03p75320 Brassica napus
C05p27490 Brassica napus
C07p16800 Brassica napus
CAN.G1139.15 Capsicum annuum
CANSAT11G2387 Cannabis sativa
CARHR027980 Cardamine hirsuta
Carub.0001s2696 Capsella rubella
Ca_06324_v3 Cicer arietinum L.
CBR_g4120 Chara braunii
Cc03_g14490 Coffea canephora
CDE04G1024 Ceratophyllum demersum
Cfa019551 Carpinus fangiana
Cfa023806 Carpinus fangiana
Ciclev10009295m.g Citrus clementina
CiPaw.11G159200 Carya illinoinensis
CiPaw.12G113000 Carya illinoinensis
ClCG06G000520 Citrullus lanatus
COL.COLO4_31399 Corchorus olitorius
Cpa.g.sc7.5 Carica papaya
Cre06.g290100 Chlamydomonas reinhardtii
CsaV3_6G006300 Cucumis sativus L.
CSS0007932 Camellia sinensis var. sinensis
CSS0012110 Camellia sinensis var. sinensis
CSS0046625 Camellia sinensis var. sinensis
DCAR_012946 Daucus carota
DCAR_019273 Daucus carota
Dinv05292 Davidia involucrata
Dinv33222 Davidia involucrata
Duzib160G0652 Durio zibethinus
Duzib192G0083 Durio zibethinus
Duzib235G0074 Durio zibethinus
ECA238G2064 Erigeron canadensis
EL10Ac2g03342 Beta vulgaris
Eucgr.J00643 Eucalyptus grandis
FAN16G1068 Fragaria x ananassa
FAN21G1823 Fragaria x ananassa
FAN25G2670 Fragaria x ananassa
FvH4_3g22850 Fragaria vesca
Glyma.02G291600 Glycine max
Glyma.08G316900 Glycine max
Glyma.12G132100 Glycine max
Glyma.14G023200 Glycine max
Glyma.16G136466 Glycine max
Glyma.18G096200 Glycine max
Gohir.A01G165866 Gossypium hirsutum
Gohir.A05G158100 Gossypium hirsutum
Gohir.A07G160875 Gossypium hirsutum
Gohir.A09G074000 Gossypium hirsutum
Gohir.A10G028700 Gossypium hirsutum
Gohir.A10G196100 Gossypium hirsutum
Gohir.A11G169750 Gossypium hirsutum
Gohir.A12G052800 Gossypium hirsutum
Gohir.D05G160800 Gossypium hirsutum
Gohir.D09G073600 Gossypium hirsutum
Gohir.D10G029100 Gossypium hirsutum
Gorai.006G088600 Gossypium raimondii
Gorai.009G166000 Gossypium raimondii
Gorai.011G031000 Gossypium raimondii
GSVIVG01038187001 Vitis vinifera
HanXRQChr14g0462891 Helianthus annuus
HanXRQChr15g0493141 Helianthus annuus
Haze_09311 Corylus avellana
Haze_23535 Corylus avellana
Hma1.2p1_0264F.1_g106110 Hydrangea macrophylla
HPP92_012149 Vanilla planifolia
Hund02378 Selenicereus undatus
Lalb_Chr04g0248391 Lupinus albus
Lalb_Chr15g0081231 Lupinus albus
Lalb_Chr15g0081241 Lupinus albus
Lalb_Chr15g0081251 Lupinus albus
Lj2A346T41 Lonicera japonica
Lj6g0024406 Lotus japonicus
LjContig00272g0022132 Lotus japonicus
Lsat_1_v5_gn_0_13460 Lactuca sativa
Lsat_1_v5_gn_1_3680 Lactuca sativa
Lsat_1_v5_gn_1_90541 Lactuca sativa
Lsat_1_v5_gn_2_134160 Lactuca sativa
Lsat_1_v5_gn_2_37881 Lactuca sativa
Lsat_1_v5_gn_3_70401 Lactuca sativa
Lsat_1_v5_gn_3_95681 Lactuca sativa
Lsat_1_v5_gn_4_133441 Lactuca sativa
Lsat_1_v5_gn_5_170320 Lactuca sativa
Lsat_1_v5_gn_8_13220 Lactuca sativa
Lsat_1_v5_gn_9_58001 Lactuca sativa
Manes.08G040100 Manihot esculenta
Manes.09G040400 Manihot esculenta
Mapoly0079s0013 Marchantia polymorpha
Mapoly0140s0004 Marchantia polymorpha
MBI05_g13422_MAGBIO Magnolia biondii
MCO15G081 Micromonas commoda
MD03G1200000 Malus domestica
MD11G1217000 Malus domestica
Medtr3g052210 Medicago truncatula
Medtr5g092870 Medicago truncatula
MELO3C022490.2 Cucumis melo
Migut.H00835 Erythranthe guttata
Migut.L00733 Erythranthe guttata
Migut.L00928 Erythranthe guttata
MSTRG.15254 Avicennia marina
Nitab4.5_0000151g0150 Nicotiana tabacum
Nitab4.5_0006944g0020 Nicotiana tabacum
Nitab4.5_0015265g0010 Nicotiana tabacum
Nn1g00740 Nelumbo nucifera
Nn6g33747 Nelumbo nucifera
Oeu018052.1 Olea europaea
Oeu039254.1 Olea europaea
Os01g0963300 Oryza sativa ssp. japonica
Os11g0168100 Oryza sativa ssp. japonica
Peaxi162Scf00341g00410 Petunia axillaris
PGR119G0635 Punica granatum
PGSC0003DMG400015457 Solanum tuberosum
Phvul.006G044400 Phaseolus vulgaris
Phvul.008G267900 Phaseolus vulgaris
Potri.004G050800 Populus trichocarpa
Potri.011G059700 Populus trichocarpa
Pp3c12_22240 Physcomitrium patens
Pp3c17_23220 Physcomitrium patens
Pp3c3_31110 Physcomitrium patens
PRCOL_00002408 Prasinoderma coloniale
PRCOL_00003132 Prasinoderma coloniale
Prupe.4G214600 Prunus persica
Psat2g011920 Pisum sativum
Psat5g178600 Pisum sativum
PSO339G1992 Papaver somniferum
PSO648G0105 Papaver somniferum
QL01p015305 Quercus lobata
QL01p015314 Quercus lobata
QL08p025876 Quercus lobata
QL08p025878 Quercus lobata
RcHm_v2.0_Chr5g0040091 Rosa chinensis
Rhsim02G0085700 Rhododendron simsii
RhsimUnG0015200 Rhododendron simsii
Sabra11G0041300 Salix brachista
Sc12g0007550 Simmondsia chinensis
Sed0001901 Sechium edule
Sed0014057 Sechium edule
SEGI_08171 Sequoiadendron giganteum
SGA_v2.0_scaffold189G40381 Striga asiatica
SGA_v2.0_scaffold20G08963 Striga asiatica
SMO144G0089 Selaginella moellendorffii
SMO337G0082 Selaginella moellendorffii
Solyc12g089150.2 Solanum lycopersicum
Sopen12g031020 Solanum pennellii
Sp1g24750 Schrenkiella parvula
TAR375G0806 Trochodendron aralioides
TAR629G2543 Trochodendron aralioides
THA.LOC104812620 Tarenaya hassleriana
THA.LOC104820574 Tarenaya hassleriana
Thecc.06G179100 Theobroma cacao
Thhalv10008609m.g Eutrema salsugineum
TPR.G1154 Trifolium pratense
TPR.G33765 Trifolium pratense
TWI38G2316 Tripterygium wilfordii
TWI63G0523 Tripterygium wilfordii
unitig_37.g12355 Utricularia gibba
unitig_46.g18655 Utricularia gibba
vmacro02467 Vaccinium macrocarpon
vmacro15697 Vaccinium macrocarpon
VMungo0540G1494 Vigna mungo
VMungo0647G0941 Vigna mungo
Zm00001eb140280 Zea mays
Zm00001eb400730 Zea mays

User provided reference genes

Program Settings