Gene: Cre06.g290100
General Information
Structural Information
- Species Chlamydomonas reinhardtii
- Gene Identifier Cre06.g290100
- Transcript Identifier Cre06.g290100.t1.2
- Gene Type Coding gene
- Location chromosome_6 : 6132718-6135357 : negative
Gene Family Information
- ID HOM05D003536
- #Genes/#Species 193/97
- Phylogenetic origin
- ID ORTHO05D004233
- #Genes/#Species 186/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Cre06.g290100.v5.5
- pacid 30779799
- alias g6730.t1
Descriptions
- Description Early endosomal Qc-SNARE protein, Syx6/Tlg1/Syntaxin 6-family (Qc.III.b)
- Description Early endosomal Qc-SNARE protein, Syx6/Tlg1/Syntaxin 6-family. Involved in Golgi/endosomal trafficking. Class Qc.III.b SNARE, involved in Golgi-to-early endosome trafficking (PMID: 17596510). Previously annotated as SYP6
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016192 | ISO | PLAZA Homology (enrichment) | vesicle-mediated transport | HOM05D003536 |
| GO:0006886 | ISO | PLAZA Integrative Orthology | intracellular protein transport | AT1G28490 |
| GO:0048193 | ISO | PLAZA Homology (enrichment) | Golgi vesicle transport | HOM05D003536 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G28490 |
| GO:0005484 | ISO | PLAZA Integrative Orthology | SNAP receptor activity | AT1G28490 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT1G28490 |
| GO:0016020 | ISO | PLAZA Homology (enrichment) | membrane | HOM05D003536 |
| GO:0032588 | ISO | PLAZA Integrative Orthology | trans-Golgi network membrane | AT1G28490 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 22.3.5.1.4.2 | Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qc-type SNARE components.SYP6-group component |