Gene: AT1G28490

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G28490
  • Transcript Identifier AT1G28490.1
  • Gene Type Coding gene
  • Location Chr1 : 10016433-10017842 : positive

Gene Family Information

  • ID HOM05D003536
  • #Genes/#Species 193/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G28490.1
  • symbol SYP61
  • Alias ATSYP61,OSM1
  • uniprot Q946Y7

Descriptions

  • Description syntaxin of plants 61
  • Computational description syntaxin of plants 61 (SYP61); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), t-SNARE (InterPro:IPR010989), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: syntaxin of plants 52 (TAIR:AT1G79590.2); Has 935 Blast hits to 902 proteins in 210 species: Archae - 0; Bacteria - 8; Metazoa - 293; Fungi - 255; Plants - 233; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0048193
IEA
Gene OntologyGolgi vesicle transport
GO:0048193
IEA
InterProGolgi vesicle transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0009738
IEA
GOA Databaseabscisic acid-activated signaling pathway
GO:0048278
IBA
Gene Ontologyvesicle docking1
GO:0006906
IBA
Gene Ontologyvesicle fusion1
GO:0006886
IDA
IBA
IEA
Gene Ontologyintracellular protein transport1 2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005484
IBA
TAS, IEA
Gene OntologySNAP receptor activity1 3
GO:0000149
IBA
Gene OntologySNARE binding1
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IBA
Gene Ontologyintegral component of membrane1
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
ISM
Gene OntologyGolgi apparatus
GO:0012505
IBA
Gene Ontologyendomembrane system1
GO:0031201
IBA
Gene OntologySNARE complex1
GO:0032588
IDA
Gene Ontologytrans-Golgi network membrane5
GO:0005802
IDA
Gene Ontologytrans-Golgi network2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015260 Syntaxin 6, N-terminal
IPR000727 Target SNARE coiled-coil homology domain
IPR010989 SNARE
Mapman id Description
22.3.5.1.4.2 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qc-type SNARE components.SYP6-group component