Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p48680 Brassica napus
A09p45150 Brassica napus
Aa31LG10G7170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3832 Anthoceros agrestis
Actinidia13976 Actinidia chinensis
Actinidia20660 Actinidia chinensis
Actinidia21545 Actinidia chinensis
AL3G19400 Arabidopsis lyrata
AL4G45740 Arabidopsis lyrata
AL5G32650 Arabidopsis lyrata
Aqoxy2G00168 Aquilegia oxysepala
Aqoxy2G00174 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2BQ2P0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L35I2V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4LWN5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V60VE2 Arachis hypogaea
AT3G08020 Arabidopsis thaliana
AT3G52100 Arabidopsis thaliana
ATR0332G091 Amborella trichopoda
Atru.chr11.2606 Acer truncatum
AUR62009395 Chenopodium quinoa
AUR62023077 Chenopodium quinoa
AUR62043479 Chenopodium quinoa
BcaB01g00446 Brassica carinata
BcaB01g02046 Brassica carinata
BcaB02g08589 Brassica carinata
BcaB03g16122 Brassica carinata
BcaB05g24179 Brassica carinata
BcaC03g16378 Brassica carinata
BcaC06g33023 Brassica carinata
BcaC06g33024 Brassica carinata
BcaC06g33381 Brassica carinata
BcaC06g36048 Brassica carinata
BcaC08g45915 Brassica carinata
BcaC09g47972 Brassica carinata
BcaC09g49888 Brassica carinata
BcaNung06091 Brassica carinata
BolC1t03102H Brassica oleracea
BolC1t05508H Brassica oleracea
BolC2t10232H Brassica oleracea
BolC2t10233H Brassica oleracea
BolC7t45196H Brassica oleracea
BolC8t50353H Brassica oleracea
BraA01t04348Z Brassica rapa
BraA03t13971Z Brassica rapa
BraA09t39978Z Brassica rapa
C02p42000 Brassica napus
C06p37170 Brassica napus
C07p46790 Brassica napus
C08p27360 Brassica napus
CAN.G205.12 Capsicum annuum
CAN.G219.38 Capsicum annuum
CANSAT80G0550 Cannabis sativa
CARHR058580 Cardamine hirsuta
CARHR082750 Cardamine hirsuta
CARHR161810 Cardamine hirsuta
Carub.0003s0760 Capsella rubella
Carub.0005s1842 Capsella rubella
Ca_19577_v3 Cicer arietinum L.
Cc02_g28130 Coffea canephora
CDE05G0662 Ceratophyllum demersum
CDE05G3403 Ceratophyllum demersum
Ciclev10030635m.g Citrus clementina
CiPaw.13G006400 Carya illinoinensis
CiPaw.14G001000 Carya illinoinensis
ClCG09G004050 Citrullus lanatus
COL.COLO4_04865 Corchorus olitorius
Cpa.g.sc125.24 Carica papaya
CsaV3_7G030950 Cucumis sativus L.
CSS0044266 Camellia sinensis var. sinensis
DCAR_029680 Daucus carota
Dinv09345 Davidia involucrata
Dinv43430 Davidia involucrata
Duzib138G1641 Durio zibethinus
ECA234G4456 Erigeron canadensis
ECA248G0343 Erigeron canadensis
EL10Ac2g04341 Beta vulgaris
Eucgr.G03370 Eucalyptus grandis
FAN01G0774 Fragaria x ananassa
FAN03G0464 Fragaria x ananassa
FAN03G2678 Fragaria x ananassa
FAN06G4268 Fragaria x ananassa
FAN10G4005 Fragaria x ananassa
FvH4_7g01200 Fragaria vesca
Glyma.09G228600 Glycine max
Glyma.12G007900 Glycine max
Gohir.A08G028300 Gossypium hirsutum
Gohir.A08G143500 Gossypium hirsutum
Gohir.D08G039066 Gossypium hirsutum
Gohir.D08G164500 Gossypium hirsutum
Gorai.004G037700 Gossypium raimondii
Gorai.004G171500 Gossypium raimondii
GSVIVG01032130001 Vitis vinifera
GSVIVG01032131001 Vitis vinifera
HanXRQChr09g0251321 Helianthus annuus
HanXRQChr17g0563011 Helianthus annuus
Haze_03181 Corylus avellana
Hma1.2p1_0495F.1_g165700 Hydrangea macrophylla
HPP92_009589 Vanilla planifolia
Hund19803 Selenicereus undatus
Hund21485 Selenicereus undatus
Lalb_Chr01g0000391 Lupinus albus
Lalb_Chr19g0140301 Lupinus albus
Lalb_Chr25g0282961 Lupinus albus
Lj3g0012564 Lotus japonicus
Lj3g0024838 Lotus japonicus
Lj9C634G4 Lonicera japonica
Lsat_1_v5_gn_1_106281 Lactuca sativa
Lsat_1_v5_gn_4_31500 Lactuca sativa
Manes.07G007000 Manihot esculenta
Manes.10G140700 Manihot esculenta
Mapoly0014s0141 Marchantia polymorpha
MBI02_g05670_MAGBIO Magnolia biondii
MBI02_g23150_MAGBIO Magnolia biondii
MBI02_g23151_MAGBIO Magnolia biondii
MBI04_g44436_MAGBIO Magnolia biondii
MBI18_g27016_MAGBIO Magnolia biondii
MBI18_g46194_MAGBIO Magnolia biondii
MD02G1308700 Malus domestica
MD07G1013100 Malus domestica
Medtr4g037745 Medicago truncatula
MELO3C023561.2 Cucumis melo
Migut.N01607 Erythranthe guttata
Migut.N01608 Erythranthe guttata
MSTRG.5029 Avicennia marina
Nitab4.5_0002918g0090 Nicotiana tabacum
Nn2g15298 Nelumbo nucifera
Nn7g36242 Nelumbo nucifera
Oeu048992.1 Olea europaea
Oeu063180.2 Olea europaea
Os12g0527800 Oryza sativa ssp. japonica
Peaxi162Scf00953g00513 Petunia axillaris
PGR031G1295 Punica granatum
PGSC0003DMG400006794 Solanum tuberosum
Phvul.011G010000 Phaseolus vulgaris
Potri.001G264800 Populus trichocarpa
Potri.009G059500 Populus trichocarpa
Potri.009G059700 Populus trichocarpa
Pp3c8_14490 Physcomitrium patens
Prupe.2G016600 Prunus persica
Psat0s1245g0040 Pisum sativum
PSO339G4096 Papaver somniferum
PSO384G4091 Papaver somniferum
QL04p008146 Quercus lobata
QL04p008498 Quercus lobata
RcHm_v2.0_Chr1g0316671 Rosa chinensis
RcHm_v2.0_Chr6g0268061 Rosa chinensis
RcHm_v2.0_Chr6g0268071 Rosa chinensis
Rhsim01G0128500 Rhododendron simsii
Rhsim12G0088200 Rhododendron simsii
Sabra09G0043900 Salix brachista
Sabra16G0162700 Salix brachista
Sc11g0009100 Simmondsia chinensis
Sc23g0005960 Simmondsia chinensis
Sed0001045 Sechium edule
Sed0002980 Sechium edule
SGA_v2.0_scaffold24G10668 Striga asiatica
SHI04072 Sapria himalayana
SHI04073 Sapria himalayana
SMO203G0227 Selaginella moellendorffii
Solyc01g087320.3 Solanum lycopersicum
Solyc01g087330.4 Solanum lycopersicum
Solyc01g087340.3 Solanum lycopersicum
Solyc01g087360.3 Solanum lycopersicum
Solyc01g087370.2 Solanum lycopersicum
Solyc01g087390.2 Solanum lycopersicum
Solyc01g087400.4 Solanum lycopersicum
Solyc01g087410.4 Solanum lycopersicum
Solyc01g087420.4 Solanum lycopersicum
Solyc01g087430.3 Solanum lycopersicum
Sopen01g034350 Solanum pennellii
Sopen01g034360 Solanum pennellii
Sopen01g034370 Solanum pennellii
Sopen01g034440 Solanum pennellii
Sopen01g034460 Solanum pennellii
Sp3g06930 Schrenkiella parvula
Sp5g10200 Schrenkiella parvula
TAR369G0316 Trochodendron aralioides
TAR369G0698 Trochodendron aralioides
TAR633G0763 Trochodendron aralioides
THA.LOC104827429 Tarenaya hassleriana
Thecc.01G409300 Theobroma cacao
Thhalv10010234m.g Eutrema salsugineum
Thhalv10020119m.g Eutrema salsugineum
TPR.G3645 Trifolium pratense
TWI09G1532 Tripterygium wilfordii
TWI73G0346 Tripterygium wilfordii
unitig_699.g19826 Utricularia gibba
unitig_8.g3623 Utricularia gibba
vmacro21192 Vaccinium macrocarpon
VMungo1127G0476 Vigna mungo
Zm00001eb137800 Zea mays
Zm00001eb410840 Zea mays

User provided reference genes

Program Settings