Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p35660 Brassica napus
A03p20200 Brassica napus
A06p40860 Brassica napus
A06p40870 Brassica napus
A09p03530 Brassica napus
Aa31LG2G4880 Aethionema arabicum
Aa31LG9G1280 Aethionema arabicum
Actinidia35752 Actinidia chinensis
Ah.07g200110 Amaranthus hybridus
Ah.12g054660 Amaranthus hybridus
AL3G15880 Arabidopsis lyrata
AL4G11650 Arabidopsis lyrata
AL5G17260 Arabidopsis lyrata
AL5G17310 Arabidopsis lyrata
AL5G17330 Arabidopsis lyrata
Aqoxy3G02924 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.816STY Arachis hypogaea
AT3G27830 Arabidopsis thaliana
AT3G27840 Arabidopsis thaliana
AT3G27850 Arabidopsis thaliana
ATR0789G179 Amborella trichopoda
ATR1156G070 Amborella trichopoda
Atru.chr6.2226 Acer truncatum
Atru.chr6.2319 Acer truncatum
AUR62019712 Chenopodium quinoa
AUR62037980 Chenopodium quinoa
BcaB01g03824 Brassica carinata
BcaB07g30141 Brassica carinata
BcaC01g05647 Brassica carinata
BcaC01g05648 Brassica carinata
BcaC03g17492 Brassica carinata
BcaC06g30958 Brassica carinata
BcaC06g30959 Brassica carinata
BcaC06g33779 Brassica carinata
BcaC06g33780 Brassica carinata
BcaC06g33781 Brassica carinata
BolC2t11513H Brassica oleracea
BolC3t14763H Brassica oleracea
BolC7t44212H Brassica oleracea
BolC7t44213H Brassica oleracea
BolC9t53296H Brassica oleracea
BraA02t08568Z Brassica rapa
BraA03t11271Z Brassica rapa
BraA06t27008Z Brassica rapa
BraA06t27009Z Brassica rapa
BraA09t35991Z Brassica rapa
C02p54500 Brassica napus
C03p23680 Brassica napus
C07p37000 Brassica napus
C07p37010 Brassica napus
C09p03760 Brassica napus
CAN.G206.18 Capsicum annuum
CANSAT64G2824 Cannabis sativa
CARHR149300 Cardamine hirsuta
CARHR149310 Cardamine hirsuta
CARHR149320 Cardamine hirsuta
Carub.0005s0635 Capsella rubella
Carub.0005s0636 Capsella rubella
Carub.0005s0637 Capsella rubella
Ca_04182_v3 Cicer arietinum L.
Cc07_g02040 Coffea canephora
CDE10G0273 Ceratophyllum demersum
CDE10G0897 Ceratophyllum demersum
Cfa007412 Carpinus fangiana
Ciclev10016852m.g Citrus clementina
CiPaw.03G039700 Carya illinoinensis
CiPaw.04G026100 Carya illinoinensis
ClCG09G019050 Citrullus lanatus
ClCG10G014140 Citrullus lanatus
COL.COLO4_29002 Corchorus olitorius
Cpa.g.sc39.100 Carica papaya
Cre13.g581650 Chlamydomonas reinhardtii
CsaV3_3G042510 Cucumis sativus L.
CSS0007307 Camellia sinensis var. sinensis
DCAR_015053 Daucus carota
DCAR_021694 Daucus carota
Dinv33477 Davidia involucrata
Dinv35079 Davidia involucrata
Duzib147G0262 Durio zibethinus
ECA240G2852 Erigeron canadensis
EL10Ac4g08602 Beta vulgaris
FAN02G4450 Fragaria x ananassa
FAN05G3949 Fragaria x ananassa
FAN09G0266 Fragaria x ananassa
FAN14G3916 Fragaria x ananassa
FvH4_1g16261 Fragaria vesca
FvH4_6g50910 Fragaria vesca
Glyma.11G099300 Glycine max
Glyma.12G025400 Glycine max
Gohir.A05G358400 Gossypium hirsutum
Gohir.A07G221400 Gossypium hirsutum
Gohir.A08G009500 Gossypium hirsutum
Gohir.D04G055700 Gossypium hirsutum
Gohir.D07G228100 Gossypium hirsutum
Gohir.D08G019600 Gossypium hirsutum
Gorai.001G263100 Gossypium raimondii
Gorai.004G014100 Gossypium raimondii
Gorai.012G062600 Gossypium raimondii
GSVIVG01032454001 Vitis vinifera
HanXRQChr05g0136281 Helianthus annuus
HanXRQChr07g0198851 Helianthus annuus
Haze_14690 Corylus avellana
Hma1.2p1_0858F.1_g229290 Hydrangea macrophylla
Hma1.2p1_0993F.1_g245370 Hydrangea macrophylla
HPP92_005137 Vanilla planifolia
Lalb_Chr06g0175931 Lupinus albus
Lalb_Chr10g0093931 Lupinus albus
Lalb_Chr17g0337251 Lupinus albus
Lj2g0009781 Lotus japonicus
LjContig00484g0021782 Lotus japonicus
Lju41C36T20 Lonicera japonica
Lsat_1_v5_gn_2_14440 Lactuca sativa
Lsat_1_v5_gn_2_91740 Lactuca sativa
Lsat_1_v5_gn_4_182901 Lactuca sativa
Manes.04G063300 Manihot esculenta
Manes.11G104900 Manihot esculenta
Mapoly0071s0038 Marchantia polymorpha
MBI10_g28017_MAGBIO Magnolia biondii
MD09G1031000 Malus domestica
MD17G1032900 Malus domestica
Medtr6g006060 Medicago truncatula
MELO3C009965.2 Cucumis melo
MELO3C021553.2 Cucumis melo
Migut.H00104 Erythranthe guttata
Migut.K01378 Erythranthe guttata
Nitab4.5_0003505g0030 Nicotiana tabacum
Nitab4.5_0004321g0010 Nicotiana tabacum
Nitab4.5_0005820g0010 Nicotiana tabacum
Nitab4.5_0006542g0030 Nicotiana tabacum
Nitab4.5_0008510g0020 Nicotiana tabacum
Nitab4.5_0009062g0010 Nicotiana tabacum
Nitab4.5_0010319g0050 Nicotiana tabacum
Nn3g16848 Nelumbo nucifera
Oeu014862.1 Olea europaea
Oeu054688.1 Olea europaea
Os01g0662300 Oryza sativa ssp. japonica
Os05g0568300 Oryza sativa ssp. japonica
Peaxi162Scf00481g00619 Petunia axillaris
Peaxi162Scf00700g00054 Petunia axillaris
PGR083G1866 Punica granatum
PGR142G3122 Punica granatum
PGSC0003DMG400000487 Solanum tuberosum
PGSC0003DMG400000488 Solanum tuberosum
Phvul.011G027700 Phaseolus vulgaris
Potri.001G346100 Populus trichocarpa
Pp3c16_2080 Physcomitrium patens
Pp3c25_1440 Physcomitrium patens
Pp3c26_10990 Physcomitrium patens
Pp3c4_24130 Physcomitrium patens
Pp3c5_2700 Physcomitrium patens
PRCOL_00004615 Prasinoderma coloniale
Prupe.3G286600 Prunus persica
Psat1g056240 Pisum sativum
PSO017G1080 Papaver somniferum
PSO063G4512 Papaver somniferum
PSO478G3901 Papaver somniferum
PSO832G4560 Papaver somniferum
QL02p075946 Quercus lobata
QL02p075960 Quercus lobata
RcHm_v2.0_Chr2g0172281 Rosa chinensis
Rhsim08G0053400 Rhododendron simsii
Rhsim10G0020100 Rhododendron simsii
Sabra16G0225100 Salix brachista
Sabra16G0225800 Salix brachista
SalBow1G5378 Salvia bowleyana
SalBow7G4259 Salvia bowleyana
Sc03g0011050 Simmondsia chinensis
Sed0013614 Sechium edule
Sed0017530 Sechium edule
Sed0027802 Sechium edule
SEGI_29600 Sequoiadendron giganteum
SGA_v2.0_scaffold30G12445 Striga asiatica
SGA_v2.0_scaffold40G15640 Striga asiatica
SMO356G0309 Selaginella moellendorffii
Solyc02g086730.3 Solanum lycopersicum
Solyc02g086740.1 Solanum lycopersicum
Sopen02g031490 Solanum pennellii
Sopen02g031500 Solanum pennellii
Sp2g16890 Schrenkiella parvula
TAR374G1092 Trochodendron aralioides
TAR622G1176 Trochodendron aralioides
THA.LOC104805389 Tarenaya hassleriana
THA.LOC104823944 Tarenaya hassleriana
Thecc.04G011600 Theobroma cacao
Thhalv10004960m.g Eutrema salsugineum
Thhalv10004964m.g Eutrema salsugineum
TPR.G27369 Trifolium pratense
TWI12G0626 Tripterygium wilfordii
unitig_52.g17666 Utricularia gibba
unitig_62.g23149 Utricularia gibba
VMungo1127G1762 Vigna mungo
Zm00001eb157660 Zea mays
Zm00001eb359610 Zea mays

User provided reference genes

Program Settings