Gene: SGA_v2.0_scaffold40G15640
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold40G15640
- Transcript Identifier SGA_v2.0_scaffold40T15640
- Gene Type Coding gene
- Location scaffold40 : 1954911-1956679 : positive
Gene Family Information
- ID HOM05D003530
- #Genes/#Species 193/92
- Phylogenetic origin
- ID ORTHO05D004017
- #Genes/#Species 194/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product 50S ribosomal protein L12, chloroplastic
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006412 | IEA | InterPro | translation | |
GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT3G27850 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G27830 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005840 | IEA | InterPro | ribosome | |
GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G27830 |
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G27830 |
GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G27830 |
GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT3G27830 |
GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | AT3G27830 |
GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT3G27830 |
GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT3G27830 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR013823 | Ribosomal protein L7/L12, C-terminal |
IPR036235 | Ribosomal protein L7/L12, oligomerisation domain superfamily |
IPR000206 | Ribosomal protein L7/L12 |
IPR014719 | Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like |
IPR035513 | Invertase/pectin methylesterase inhibitor domain superfamily |
IPR008932 | Ribosomal protein L7/L12, oligomerisation |
Mapman id | Description |
---|---|
17.7.2.1.10 | Protein biosynthesis.organelle machinery.plastidial ribosome.large ribosomal subunit proteome.component psRPL12 |