Gene: AT3G27850

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G27850
  • Transcript Identifier AT3G27850.1
  • Gene Type Coding gene
  • Location Chr3 : 10324905-10325468 : positive

Gene Family Information

  • ID HOM05D003530
  • #Genes/#Species 193/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G27850.1
  • symbol RPL12-C
  • uniprot P36212

Descriptions

  • Description ribosomal protein L12-C
  • Computational description ribosomal protein L12-C (RPL12-C); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: defense response to bacterium, translation; LOCATED IN: in 6 components; EXPRESSED IN: juvenile leaf, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7/L12 (InterPro:IPR000206), Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: ribosomal protein L12-A (TAIR:AT3G27830.1); Has 8543 Blast hits to 8543 proteins in 2749 species: Archae - 0; Bacteria - 5675; Metazoa - 193; Fungi - 132; Plants - 248; Viruses - 0; Other Eukaryotes - 2295 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042742
IEP
GOA Databasedefense response to bacterium
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
TAS
Gene Ontologytranslation1
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
Gene Ontologystructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0009536
IEA
GOA Databaseplastid
GO:0009579
IDA
GOA Databasethylakoid
GO:0009579
HDA
Gene Ontologythylakoid3
GO:0009535
IDA
GOA Databasechloroplast thylakoid membrane
GO:0009535
HDA
Gene Ontologychloroplast thylakoid membrane4
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma5
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
ISM
Gene Ontologychloroplast
GO:0000311
ISS
Gene Ontologyplastid large ribosomal subunit1
GO:0005829
HDA
Gene Ontologycytosol6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily
IPR000206 Ribosomal protein L7/L12
IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR013823 Ribosomal protein L7/L12, C-terminal
IPR008932 Ribosomal protein L7/L12, oligomerisation
Mapman id Description
17.7.2.1.10 Protein biosynthesis.organelle machinery.plastidial ribosome.large ribosomal subunit proteome.component psRPL12