Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44770 Brassica napus
Aa31LG8G11760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1035 Anthoceros agrestis
Actinidia35353 Actinidia chinensis
Actinidia38465 Actinidia chinensis
Actinidia39679 Actinidia chinensis
Ah.09g231310 Amaranthus hybridus
Ah.14g085070 Amaranthus hybridus
AL3G43820 Arabidopsis lyrata
Aqoxy2G04049 Aquilegia oxysepala
Aqoxy7G02082 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C7EUSB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G5MRUB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RY2Z4G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UL7UL4 Arachis hypogaea
AT2G06530 Arabidopsis thaliana
ATR0559G333 Amborella trichopoda
Atru.chr7.1664 Acer truncatum
AUR62025178 Chenopodium quinoa
AUR62028995 Chenopodium quinoa
BcaB08g34512 Brassica carinata
BcaC01g03144 Brassica carinata
BolC3t17839H Brassica oleracea
BraA03t13612Z Brassica rapa
C03p55620 Brassica napus
CAN.G1963.11 Capsicum annuum
CANSAT56G1275 Cannabis sativa
CANSAT56G1600 Cannabis sativa
CANSAT56G2739 Cannabis sativa
CARHR103860 Cardamine hirsuta
Carub.0003s2729 Capsella rubella
Ca_05010_v3 Cicer arietinum L.
Ca_26620_v3 Cicer arietinum L.
CBR_g31704 Chara braunii
Cc06_g11900 Coffea canephora
CDE02G2200 Ceratophyllum demersum
CDE09G0837 Ceratophyllum demersum
Cfa003030 Carpinus fangiana
Cfa022077 Carpinus fangiana
Ciclev10009411m.g Citrus clementina
CiPaw.01G220500 Carya illinoinensis
CiPaw.03G210000 Carya illinoinensis
CiPaw.04G145800 Carya illinoinensis
ClCG03G015260 Citrullus lanatus
ClCG09G000920 Citrullus lanatus
COL.COLO4_18133 Corchorus olitorius
Cpa.g.sc25.103 Carica papaya
Cpa.g.sc28.84 Carica papaya
Cre04.g213450 Chlamydomonas reinhardtii
CsaV3_1G040780 Cucumis sativus L.
CsaV3_7G034540 Cucumis sativus L.
CSS0009903 Camellia sinensis var. sinensis
CSS0039396 Camellia sinensis var. sinensis
DCAR_011953 Daucus carota
DCAR_024729 Daucus carota
Dinv25580 Davidia involucrata
Dinv42370 Davidia involucrata
Duzib168G1450 Durio zibethinus
Duzib187G1578 Durio zibethinus
ECA234G2483 Erigeron canadensis
ECA236G0053 Erigeron canadensis
ECA236G0054 Erigeron canadensis
EL10Ac2g02708 Beta vulgaris
EL10Ac8g19129 Beta vulgaris
Eucgr.C00837 Eucalyptus grandis
Eucgr.J02828 Eucalyptus grandis
FAN19G0472 Fragaria x ananassa
FAN23G1326 Fragaria x ananassa
FAN26G0984 Fragaria x ananassa
FAN26G1346 Fragaria x ananassa
FAN28G1609 Fragaria x ananassa
FvH4_1g08240 Fragaria vesca
Glyma.07G036800 Glycine max
Glyma.07G036900 Glycine max
Glyma.09G068000 Glycine max
Glyma.13G108400 Glycine max
Glyma.15G173500 Glycine max
Glyma.17G051000 Glycine max
Gohir.A06G075400 Gossypium hirsutum
Gohir.A07G013800 Gossypium hirsutum
Gohir.D06G074300 Gossypium hirsutum
Gohir.D07G013600 Gossypium hirsutum
Gorai.001G014300 Gossypium raimondii
Gorai.010G086700 Gossypium raimondii
GSVIVG01015115001 Vitis vinifera
HanXRQChr04g0126031 Helianthus annuus
HanXRQChr12g0354141 Helianthus annuus
Haze_25970 Corylus avellana
Haze_26631 Corylus avellana
Hma1.2p1_0169F.1_g074740 Hydrangea macrophylla
Hma1.2p1_0797F.1_g219420 Hydrangea macrophylla
HPP92_012587 Vanilla planifolia
HPP92_019073 Vanilla planifolia
Hund08715 Selenicereus undatus
Lalb_Chr07g0181061 Lupinus albus
Lalb_Chr08g0232491 Lupinus albus
Lj3g0009274 Lotus japonicus
Lj4A901T13 Lonicera japonica
Lj4A909T82 Lonicera japonica
Lj6g0015271 Lotus japonicus
Lj7A683T66 Lonicera japonica
Lju5057A0G54 Lonicera japonica
Lsat_1_v5_gn_5_141861 Lactuca sativa
Manes.03G038100 Manihot esculenta
Manes.04G143300 Manihot esculenta
Manes.11G021700 Manihot esculenta
Manes.16G097600 Manihot esculenta
Mapoly0002s0091 Marchantia polymorpha
Mapoly0013s0110 Marchantia polymorpha
MBI05_g06550_MAGBIO Magnolia biondii
MBI09_g03018_MAGBIO Magnolia biondii
MBI14_g25102_MAGBIO Magnolia biondii
MCO01G752 Micromonas commoda
MD02G1086700 Malus domestica
MD15G1213900 Malus domestica
Medtr2g041190 Medicago truncatula
Medtr8g019700 Medicago truncatula
MELO3C015505.2 Cucumis melo
MELO3C024361.2 Cucumis melo
Migut.J00951 Erythranthe guttata
MSTRG.19476 Avicennia marina
Nitab4.5_0000073g0030 Nicotiana tabacum
Nitab4.5_0001866g0010 Nicotiana tabacum
Nn6g35591 Nelumbo nucifera
Nn7g37726 Nelumbo nucifera
Nn8g38719 Nelumbo nucifera
Oeu000304.1 Olea europaea
Oeu002851.2 Olea europaea
Oeu049520.1 Olea europaea
Os07g0236800 Oryza sativa ssp. japonica
Os11g0703400 Oryza sativa ssp. japonica
Peaxi162Scf00240g00129 Petunia axillaris
Peaxi162Scf00498g00721 Petunia axillaris
PGR044G2259 Punica granatum
PGR102G0404 Punica granatum
PGSC0003DMG400000328 Solanum tuberosum
Phvul.003G132700 Phaseolus vulgaris
Phvul.009G229000 Phaseolus vulgaris
Phvul.010G132400 Phaseolus vulgaris
Potri.001G170400 Populus trichocarpa
Potri.006G144300 Populus trichocarpa
Potri.018G065100 Populus trichocarpa
Pp3c13_8060 Physcomitrium patens
Pp3c3_3880 Physcomitrium patens
PRCOL_00001326 Prasinoderma coloniale
Prupe.7G203100 Prunus persica
Psat1g133000 Pisum sativum
Psat4g183200 Pisum sativum
PSO063G2352 Papaver somniferum
PSO421G0535 Papaver somniferum
QL02p061059 Quercus lobata
QL05p008227 Quercus lobata
RcHm_v2.0_Chr2g0094291 Rosa chinensis
Rhsim03G0230000 Rhododendron simsii
Rhsim05G0012600 Rhododendron simsii
Sabra01G0140900 Salix brachista
Sabra18G0057700 Salix brachista
Sabra18G0057800 Salix brachista
SalBow6G5462 Salvia bowleyana
Sc18g0002400 Simmondsia chinensis
Sed0004921 Sechium edule
Sed0007451 Sechium edule
Sed0017134 Sechium edule
SEGI_08345 Sequoiadendron giganteum
SEGI_27634 Sequoiadendron giganteum
SEGI_29805 Sequoiadendron giganteum
SGA_v2.0_scaffold91G28078 Striga asiatica
SGA_v2.0_scaffold97G29148 Striga asiatica
SMO169G0060 Selaginella moellendorffii
Solyc12g009060.2 Solanum lycopersicum
Sopen12g003990 Solanum pennellii
Sp3g24760 Schrenkiella parvula
TAR383G0894 Trochodendron aralioides
TAR626G1068 Trochodendron aralioides
THA.LOC104808898 Tarenaya hassleriana
THA.LOC104815322 Tarenaya hassleriana
Thecc.09G081000 Theobroma cacao
Thhalv10002656m.g Eutrema salsugineum
TPR.G31545 Trifolium pratense
TPR.G40839 Trifolium pratense
TPR.G7396 Trifolium pratense
TWI34G1673 Tripterygium wilfordii
TWI63G0377 Tripterygium wilfordii
unitig_26.g9178 Utricularia gibba
unitig_749.g14236 Utricularia gibba
vmacro06320 Vaccinium macrocarpon
vmacro17176 Vaccinium macrocarpon
VMungo0331G1243 Vigna mungo
VMungo1215G2335 Vigna mungo
VMungo1309G0527 Vigna mungo
Zm00001eb094970 Zea mays
Zm00001eb164660 Zea mays
Zm00001eb303830 Zea mays

User provided reference genes

Program Settings